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Report for CCDS43583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43583.1 Public Homo sapiens 7 GRB10 24 110 108 CCDS HistoryNCBI Gene:2887Re-query CCDS DB by CCDS ID:43583.1Re-query CCDS DB by GeneID:2887See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 43583.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335866.7 ENSP00000338543.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335866.7Link to Ensembl Protein Viewer:ENSP00000338543.3Re-query CCDS DB by Nucleotide ID:ENST00000335866Re-query CCDS DB by Protein ID:ENSP00000338543
Original member Current member EBI ENST00000398810.6 ENSP00000381790.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398810.6Link to Ensembl Protein Viewer:ENSP00000381790.2Re-query CCDS DB by Nucleotide ID:ENST00000398810Re-query CCDS DB by Protein ID:ENSP00000381790
Original member Current member EBI ENST00000407526.6 ENSP00000385046.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407526.6Link to Ensembl Protein Viewer:ENSP00000385046.1Re-query CCDS DB by Nucleotide ID:ENST00000407526Re-query CCDS DB by Protein ID:ENSP00000385046
Original member Current member EBI ENST00000402578.5 ENSP00000385189.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402578.5Link to Ensembl Protein Viewer:ENSP00000385189.1Re-query CCDS DB by Nucleotide ID:ENST00000402578Re-query CCDS DB by Protein ID:ENSP00000385189
Original member Current member EBI ENST00000406641.5 ENSP00000385366.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406641.5Link to Ensembl Protein Viewer:ENSP00000385366.1Re-query CCDS DB by Nucleotide ID:ENST00000406641Re-query CCDS DB by Protein ID:ENSP00000385366
Original member Current member EBI ENST00000403097.6 ENSP00000385544.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403097.6Link to Ensembl Protein Viewer:ENSP00000385544.2Re-query CCDS DB by Nucleotide ID:ENST00000403097Re-query CCDS DB by Protein ID:ENSP00000385544
Original member Current member EBI ENST00000402497.6 ENSP00000385748.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402497.6Link to Ensembl Protein Viewer:ENSP00000385748.1Re-query CCDS DB by Nucleotide ID:ENST00000402497Re-query CCDS DB by Protein ID:ENSP00000385748
Original member Current member EBI ENST00000645075.2 ENSP00000495341.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645075.2Link to Ensembl Protein Viewer:ENSP00000495341.2Re-query CCDS DB by Nucleotide ID:ENST00000645075Re-query CCDS DB by Protein ID:ENSP00000495341
Original member Current member EBI ENST00000643299.1 ENSP00000496245.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643299.1Link to Ensembl Protein Viewer:ENSP00000496245.1Re-query CCDS DB by Nucleotide ID:ENST00000643299Re-query CCDS DB by Protein ID:ENSP00000496245
Original member Current member NCBI NM_001001550.3 NP_001001550.1 Accepted alive Link to Nucleotide Sequence:NM_001001550.3Link to Protein Sequence:NP_001001550.1Re-query CCDS DB by Nucleotide ID:NM_001001550Re-query CCDS DB by Protein ID:NP_001001550Link to BLAST:NP_001001550.1
Original member Current member NCBI NM_001001555.3 NP_001001555.1 Accepted alive Link to Nucleotide Sequence:NM_001001555.3Link to Protein Sequence:NP_001001555.1Re-query CCDS DB by Nucleotide ID:NM_001001555Re-query CCDS DB by Protein ID:NP_001001555Link to BLAST:NP_001001555.1
Original member Current member NCBI NM_001350816.3 NP_001337745.2 Accepted alive Link to Nucleotide Sequence:NM_001350816.3Link to Protein Sequence:NP_001337745.2Re-query CCDS DB by Nucleotide ID:NM_001350816Re-query CCDS DB by Protein ID:NP_001337745Link to BLAST:NP_001337745.2
Original member Current member NCBI NM_001371008.1 NP_001357937.1 Accepted alive Link to Nucleotide Sequence:NM_001371008.1Link to Protein Sequence:NP_001357937.1Re-query CCDS DB by Nucleotide ID:NM_001371008Re-query CCDS DB by Protein ID:NP_001357937Link to BLAST:NP_001357937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001550.1 536 Q13322-3 536 100% 0 0
NP_001001555.1 536 Q13322-3 536 100% 0 0
NP_001337745.2 536 Q13322-3 536 100% 0 0
NP_001357937.1 536 Q13322-3 536 100% 0 0

Chromosomal Locations for CCDS 43583.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 50592952 50593098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50595437 50595530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50603998 50604085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50604311 50604377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50605290 50605406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50606337 50606414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50612741 50612839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50614770 50614880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50616210 50616347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50618071 50618139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50619170 50619285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50626822 50626978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50669722 50669863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 50674436 50674623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGAATGCATCCCTGGAGAGCCTGTACTCGGCCTGCAGCATGCAGTCAGACACGGTGCCCCTCCTGCAGA
ATGGCCAGCATGCCCGCAGCCAGCCTCGGGCTTCAGGCCCTCCTCGGTCCATCCAGCCACAGGTGTCCCC
GAGGCAGAGGGTGCAGCGCTCCCAGCCTGTGCACATCCTCGCTGTCAGGCGCCTTCAGGAGGAAGACCAG
CAGTTTAGAACCTCATCTCTGCCGGCCATCCCCAATCCTTTTCCTGAACTCTGTGGCCCTGGGAGCCCCC
CTGTGCTCACGCCGGGTTCTTTACCTCCGAGCCAGGCCGCCGCAAAGCAGGATGTTAAAGTCTTTAGTGA
AGATGGGACAAGCAAAGTGGTGGAGATTCTAGCAGACATGACAGCCAGAGACCTGTGCCAATTGCTGGTT
TACAAAAGTCACTGTGTGGATGACAACAGCTGGACACTAGTGGAGCACCACCCGCACCTAGGATTAGAGA
GGTGCTTGGAAGACCATGAGCTGGTGGTCCAGGTGGAGAGTACCATGGCCAGTGAGAGTAAATTTCTATT
CAGGAAGAATTACGCAAAATACGAGTTCTTTAAAAATCCCATGAATTTCTTCCCAGAACAGATGGTTACT
TGGTGCCAGCAGTCAAATGGCAGTCAAACCCAGCTTTTGCAGAATTTTCTGAACTCCAGTAGTTGTCCTG
AAATTCAAGGGTTTTTGCATGTGAAAGAGCTGGGAAAGAAATCATGGAAAAAGCTGTATGTGTGTTTGCG
GAGATCTGGCCTTTATTGCTCCACCAAGGGAACTTCAAAGGAACCCAGACACCTGCAGCTGCTGGCCGAC
CTGGAGGACAGCAACATCTTCTCCCTGATCGCTGGCAGGAAGCAGTACAACGCCCCTACAGACCACGGGC
TCTGCATAAAGCCAAACAAAGTCAGGAATGAAACTAAAGAGCTGAGGTTGCTCTGTGCAGAGGACGAGCA
AACCAGGACGTGCTGGATGACAGCGTTCAGACTCCTCAAGTATGGAATGCTCCTTTACCAGAATTACCGA
ATCCCTCAGCAGAGGAAGGCCTTGCTGTCCCCGTTCTCGACGCCAGTGCGCAGTGTCTCCGAGAACTCCC
TCGTGGCAATGGATTTTTCTGGGCAAACAGGACGCGTGATAGAGAATCCGGCAGAGGCCCAGAGCGCAGC
CCTGGAGGAGGGCCACGCCTGGAGGAAGCGAAGCACACGGATGAACATCCTAGGTAGCCAAAGTCCCCTC
CACCCTTCTACCCTAAGTACAGTGATTCACAGGACACAGCACTGGTTTCACGGGAGGATCTCCAGGGAGG
AATCCCACAGGATCATTAAACAGCAAGGGCTCGTGGATGGGCTTTTTCTCCTCCGTGACAGCCAGAGTAA
TCCAAAGGCATTTGTACTCACACTGTGTCATCACCAGAAAATTAAAAATTTCCAGATCTTACCTTGCGAG
GACGACGGGCAGACGTTCTTCAGCCTAGATGACGGGAACACCAAATTCTCTGACCTGATCCAGCTGGTTG
ACTTTTACCAGCTGAACAAAGGAGTCCTGCCTTGCAAACTCAAGCACCACTGCATCCGAGTGGCCTTATG
A

Translation (536 aa):
MNASLESLYSACSMQSDTVPLLQNGQHARSQPRASGPPRSIQPQVSPRQRVQRSQPVHILAVRRLQEEDQ
QFRTSSLPAIPNPFPELCGPGSPPVLTPGSLPPSQAAAKQDVKVFSEDGTSKVVEILADMTARDLCQLLV
YKSHCVDDNSWTLVEHHPHLGLERCLEDHELVVQVESTMASESKFLFRKNYAKYEFFKNPMNFFPEQMVT
WCQQSNGSQTQLLQNFLNSSSCPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSKEPRHLQLLAD
LEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTCWMTAFRLLKYGMLLYQNYR
IPQQRKALLSPFSTPVRSVSENSLVAMDFSGQTGRVIENPAEAQSAALEEGHAWRKRSTRMNILGSQSPL
HPSTLSTVIHRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCE
DDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCKLKHHCIRVAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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