NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14574.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14574.1 Public Homo sapiens X ZCCHC12 24 110 108 CCDS HistoryNCBI Gene:170261Re-query CCDS DB by CCDS ID:14574.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14574.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310164.3 ENSP00000308921.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310164.3Link to Ensembl Protein Viewer:ENSP00000308921.2Re-query CCDS DB by Nucleotide ID:ENST00000310164Re-query CCDS DB by Protein ID:ENSP00000308921
Original member Current member NCBI NM_001312891.2 NP_001299820.1 Accepted alive Link to Nucleotide Sequence:NM_001312891.2Link to Protein Sequence:NP_001299820.1Re-query CCDS DB by Nucleotide ID:NM_001312891Re-query CCDS DB by Protein ID:NP_001299820Link to BLAST:NP_001299820.1
Original member Current member NCBI NM_173798.4 NP_776159.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173798.4Link to Protein Sequence:NP_776159.1Re-query CCDS DB by Nucleotide ID:NM_173798Re-query CCDS DB by Protein ID:NP_776159Link to BLAST:NP_776159.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001299820.1 402 Q6PEW1 402 100% 0 0
NP_776159.1 402 Q6PEW1 402 100% 0 0

Chromosomal Locations for CCDS 14574.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 118825245 118826453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGGCTAGCATCATTGCACGTGTCGGTAACAGCCGGCGGCTGAATGCACCCTTGCCGCCTTGGGCCCATT
CCATGCTGAGGTCCCTGGGGAGAAGTCTCGGTCCTATAATGGCCAGCATGGCAGACAGAAACATGAAGTT
GTTCTCGGGGAGGGTGGTGCCAGCCCAAGGGGAAGAAACCTTTGAAAACTGGCTGACCCAAGTCAATGGC
GTCCTGCCAGATTGGAATATGTCTGAGGAGGAAAAGCTCAAGCGCTTGATGAAAACCCTTAGGGGCCCTG
CCCGCGAGGTCATGCGTGTGCTTCAGGCGACCAACCCTAACCTAAGTGTGGCAGATTTCTTGCGAGCCAT
GAAATTGGTGTTTGGGGAGTCTGAAAGCAGTGTGACTGCCCATGGTAAATTTTTTAACACCCTACAAGCT
CAAGGGGAGAAAGCCTCCCTTTATGTGATCCGTTTAGAGGTGCAGCTCCAGAACGCTATTCAGGCAGGCA
TTATAGCTGAGAAAGATGCAAACCGGACTCGCTTGCAGCAGCTCCTTTTAGGCGGTGAGCTGAGTAGGGA
CCTCCGACTCAGACTTAAGGATTTTCTCAGGATGTATGCAAATGAGCAGGAGCGGCTTCCCAACTTTCTG
GAGTTAATCAGAATGGTAAGGGAGGAAGAGGATTGGGATGATGCTTTTATTAAACGGAAGCGTCCAAAAA
GGTCTGAGTCAATGGTGGAGAGGGCAGTCAGCCCTGTGGCATTTCAGGGCTCCCCACCGATAGTGATCGG
CAGTGCTGACTGCAATGTGATAGAGATAGATGATACCCTCGACGACTCCGATGAGGATGTGATCCTGGTG
GAGTCTCAGGACCCTCCACTTCCATCCTGGGGTGCCCCTCCCCTCAGAGACAGGGCCAGACCTCAGGATG
AAGTGCTGGTCATTGATTCCCCCCACAATTCCAGGGCTCAGTTTCCTTCCACCAGTGGTGGTTCTGGCTA
TAAGAATAACGGTCCTGGGGAGATGCGTAGAGCCAGGAAGCGAAAACACACAATCCGCTGTTCGTATTGT
GGTGAGGAAGGCCACTCAAAAGAAACCTGTGACAACGAGAGTGACAAGGCCCAGGTTTTTGAGAATTTGA
TCATCACTCTCCAGGAGCTGACCCATACTGAGATGGAGAGGTCAAGAGTGGCCCCTGGCGAATACAATGA
CTTCTCTGAGCCACTGTAA

Translation (402 aa):
MASIIARVGNSRRLNAPLPPWAHSMLRSLGRSLGPIMASMADRNMKLFSGRVVPAQGEETFENWLTQVNG
VLPDWNMSEEEKLKRLMKTLRGPAREVMRVLQATNPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQA
QGEKASLYVIRLEVQLQNAIQAGIIAEKDANRTRLQQLLLGGELSRDLRLRLKDFLRMYANEQERLPNFL
ELIRMVREEEDWDDAFIKRKRPKRSESMVERAVSPVAFQGSPPIVIGSADCNVIEIDDTLDDSDEDVILV
ESQDPPLPSWGAPPLRDRARPQDEVLVIDSPHNSRAQFPSTSGGSGYKNNGPGEMRRARKRKHTIRCSYC
GEEGHSKETCDNESDKAQVFENLIITLQELTHTEMERSRVAPGEYNDFSEPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH