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Report for CCDS14215.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14215.1 Public Homo sapiens X ARX 24 110 108 CCDS HistoryNCBI Gene:170302Re-query CCDS DB by CCDS ID:14215.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14215.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379044.5 ENSP00000368332.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379044.5Link to Ensembl Protein Viewer:ENSP00000368332.4Re-query CCDS DB by Nucleotide ID:ENST00000379044Re-query CCDS DB by Protein ID:ENSP00000368332
Original member Current member NCBI NM_139058.3 NP_620689.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139058.3Link to Protein Sequence:NP_620689.1Re-query CCDS DB by Nucleotide ID:NM_139058Re-query CCDS DB by Protein ID:NP_620689Link to BLAST:NP_620689.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620689.1 562 Q96QS3 562 100% 0 0

Chromosomal Locations for CCDS 14215.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 25004670 25004910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 25007111 25007439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 25010260 25010305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 25012922 25013798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 25015542 25015737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1689 nt):
ATGAGCAATCAGTACCAGGAGGAGGGCTGCTCCGAGAGGCCCGAGTGCAAAAGTAAATCTCCAACTTTGC
TCTCCTCCTACTGCATCGACAGCATCCTGGGCCGGAGGAGCCCGTGCAAAATGCGGTTGCTGGGAGCCGC
GCAGAGCTTGCCTGCTCCGCTGACCAGCCGCGCCGACCCGGAAAAGGCCGTGCAAGGCTCCCCTAAGAGC
AGCAGCGCCCCGTTCGAGGCCGAGCTGCACCTGCCGCCCAAGCTGCGGCGCCTGTACGGCCCGGGCGGGG
GCCGCCTCCTTCAGGGTGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCCGCCACGGC
CACGGCGGGTCCACGCGGGGAGGCCCCTCCGCCGCCACCGCCAACCGCGCGGCCCGGGGAACGGCCGGAC
GGCGCAGGGGCCGCCGCGGCAGCCGCGGCCGCGGCCGCCGCGGCCTGGGACACGCTCAAGATCAGCCAGG
CGCCGCAGGTGAGCATCAGCCGCAGCAAGTCGTACCGCGAGAACGGGGCGCCCTTCGTGCCGCCGCCGCC
CGCGCTGGACGAGCTGGGCGGCCCGGGGGGCGTCACGCACCCGGAGGAGCGCCTCGGCGTGGCCGGCGGC
CCGGGCAGCGCCCCGGCTGCGGGTGGTGGCACCGGCACCGAGGACGACGAGGAGGAGCTGCTGGAGGACG
AAGAAGATGAGGACGAGGAAGAGGAACTGCTGGAGGACGACGAGGAGGAGCTGCTGGAGGACGACGCCCG
CGCGCTGCTCAAGGAGCCCCGGCGCTGTCCTGTGGCCGCCACTGGCGCCGTGGCCGCAGCAGCTGCCGCT
GCAGTGGCCACAGAGGGCGGGGAGCTGTCACCCAAGGAGGAGCTGCTGCTGCACCCGGAAGACGCTGAGG
GCAAGGACGGCGAGGACAGCGTGTGCCTCTCTGCGGGCAGCGACTCGGAGGAGGGGCTGCTGAAACGCAA
ACAGAGGCGCTACCGCACCACGTTCACCAGCTACCAGCTGGAGGAACTGGAGCGGGCCTTCCAGAAGACG
CACTACCCGGACGTCTTCACCAGGGAGGAACTGGCCATGAGGCTGGACTTGACCGAGGCCCGAGTCCAGG
TCTGGTTCCAGAACCGTCGGGCCAAGTGGCGCAAGCGGGAGAAGGCAGGCGCGCAGACCCACCCCCCTGG
GCTGCCCTTCCCGGGGCCGCTCTCCGCCACCCACCCGCTCAGCCCCTACCTGGACGCCAGCCCCTTCCCT
CCGCACCACCCGGCGCTCGACTCCGCTTGGACTGCCGCTGCCGCCGCCGCCGCCGCCGCCTTCCCGAGCC
TACCTCCGCCTCCGGGCTCGGCCAGCCTGCCGCCCAGCGGGGCGCCGCTGGGCCTGAGCACTTTCCTCGG
AGCGGCAGTGTTCCGACACCCAGCTTTCATCAGCCCGGCATTCGGCAGGCTCTTTTCCACAATGGCCCCC
CTGACCAGCGCGTCGACCGCGGCCGCGCTCCTGAGACAGCCCACACCCGCCGTGGAGGGCGCAGTGGCAT
CGGGCGCCCTGGCCGACCCGGCCACGGCGGCCGCAGACAGACGCGCCTCTAGCATAGCCGCGCTGAGGCT
CAAGGCCAAGGAGCACGCGGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCACCAGCACGGGCAAGGAG
GTGTGCTAA

Translation (562 aa):
MSNQYQEEGCSERPECKSKSPTLLSSYCIDSILGRRSPCKMRLLGAAQSLPAPLTSRADPEKAVQGSPKS
SSAPFEAELHLPPKLRRLYGPGGGRLLQGAAAAAAAAAAAAAAAATATAGPRGEAPPPPPPTARPGERPD
GAGAAAAAAAAAAAAWDTLKISQAPQVSISRSKSYRENGAPFVPPPPALDELGGPGGVTHPEERLGVAGG
PGSAPAAGGGTGTEDDEEELLEDEEDEDEEEELLEDDEEELLEDDARALLKEPRRCPVAATGAVAAAAAA
AVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKT
HYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSPYLDASPFP
PHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLPPSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAP
LTSASTAAALLRQPTPAVEGAVASGALADPATAAADRRASSIAALRLKAKEHAAQLTQLNILPGTSTGKE
VC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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