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Report for CCDS5753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5753.1 Public Homo sapiens 7 IMMP2L 24 110 108 CCDS HistoryNCBI Gene:83943Re-query CCDS DB by CCDS ID:5753.1Re-query CCDS DB by GeneID:83943See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5753.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331762.7 ENSP00000329553.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331762.7Link to Ensembl Protein Viewer:ENSP00000329553.3Re-query CCDS DB by Nucleotide ID:ENST00000331762Re-query CCDS DB by Protein ID:ENSP00000329553
Original member Current member EBI ENST00000405709.7 ENSP00000384966.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000405709.7Link to Ensembl Protein Viewer:ENSP00000384966.2Re-query CCDS DB by Nucleotide ID:ENST00000405709Re-query CCDS DB by Protein ID:ENSP00000384966
Original member Current member EBI ENST00000452895.5 ENSP00000399353.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452895.5Link to Ensembl Protein Viewer:ENSP00000399353.1Re-query CCDS DB by Nucleotide ID:ENST00000452895Re-query CCDS DB by Protein ID:ENSP00000399353
Original member Current member NCBI NM_001244606.2 NP_001231535.1 Accepted alive Link to Nucleotide Sequence:NM_001244606.2Link to Protein Sequence:NP_001231535.1Re-query CCDS DB by Nucleotide ID:NM_001244606Re-query CCDS DB by Protein ID:NP_001231535Link to BLAST:NP_001231535.1
Original member Current member NCBI NM_001350959.2 NP_001337888.1 Accepted alive Link to Nucleotide Sequence:NM_001350959.2Link to Protein Sequence:NP_001337888.1Re-query CCDS DB by Nucleotide ID:NM_001350959Re-query CCDS DB by Protein ID:NP_001337888Link to BLAST:NP_001337888.1
Original member Current member NCBI NM_001350960.2 NP_001337889.1 Accepted alive Link to Nucleotide Sequence:NM_001350960.2Link to Protein Sequence:NP_001337889.1Re-query CCDS DB by Nucleotide ID:NM_001350960Re-query CCDS DB by Protein ID:NP_001337889Link to BLAST:NP_001337889.1
Original member Current member NCBI NM_032549.4 NP_115938.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032549.4Link to Protein Sequence:NP_115938.1Re-query CCDS DB by Nucleotide ID:NM_032549Re-query CCDS DB by Protein ID:NP_115938Link to BLAST:NP_115938.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231535.1 175 Q96T52-1 175 100% 0 0
NP_001337888.1 175 Q96T52-1 175 100% 0 0
NP_001337889.1 175 Q96T52-1 175 100% 0 0
NP_115938.1 175 Q96T52-1 175 100% 0 0

Chromosomal Locations for CCDS 5753.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 110663602 110663721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 110886593 110886695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 110963500 110963565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111487238 111487341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111521313 111521447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGGCACAGTCACAAGGGTGGGTGAAAAGATACATCAAGGCCTTTTGTAAAGGCTTCTTTGTGGCGGTGC
CTGTGGCAGTGACTTTCTTGGATCGGGTCGCCTGTGTGGCAAGAGTAGAAGGAGCATCGATGCAGCCTTC
TTTGAATCCTGGGGGGAGCCAGTCATCTGATGTGGTGCTTTTGAACCACTGGAAAGTGAGGAATTTTGAA
GTACACCGTGGTGACATTGTATCATTGGTGTCTCCTAAAAACCCAGAACAGAAGATCATTAAGAGAGTGA
TTGCTCTTGAAGGAGATATTGTCAGAACCATAGGACACAAAAACCGGTATGTCAAAGTCCCCCGTGGTCA
CATCTGGGTTGAAGGTGATCATCATGGACACAGTTTTGACAGTAATTCTTTTGGGCCGGTTTCCCTAGGA
CTTCTGCATGCCCATGCCACACATATCCTGTGGCCCCCAGAGCGCTGGCAGAAATTGGAATCTGTTCTTC
CTCCAGAGCGCTTACCAGTACAGAGAGAAGAGGAATGA

Translation (175 aa):
MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFE
VHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLG
LLHAHATHILWPPERWQKLESVLPPERLPVQREEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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