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Report for CCDS32410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32410.1 Public Homo sapiens 16 ZKSCAN2 24 110 108 CCDS HistoryNCBI Gene:342357Re-query CCDS DB by CCDS ID:32410.1Re-query CCDS DB by GeneID:342357See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32410.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328086.12 ENSP00000331626.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328086.12Link to Ensembl Protein Viewer:ENSP00000331626.7Re-query CCDS DB by Nucleotide ID:ENST00000328086Re-query CCDS DB by Protein ID:ENSP00000331626
Original member Current member NCBI NM_001012981.5 NP_001012999.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012981.5Link to Protein Sequence:NP_001012999.3Re-query CCDS DB by Nucleotide ID:NM_001012981Re-query CCDS DB by Protein ID:NP_001012999Link to BLAST:NP_001012999.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012999.3 967 Q63HK3-1 967 100% 0 0

Chromosomal Locations for CCDS 32410.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 25239816 25240738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 25243785 25244276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 25246707 25247390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 25251909 25252035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 25252946 25253037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 25255206 25255392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 25256729 25257127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2904 nt):
ATGGCTGTCGCCCTCGACTCTCAGATCGACGCGCCCCTGGAGGTTGAGGGATGCCTAATAATGAAGGTGG
AAAAGGACCCTGAGTGGGCATCAGAGCCCATTCTGGAAGGATCGGATAGCTCTGAGACCTTCCGCAAATG
CTTCAGGCAATTCTGTTATGAGGATGTGACTGGACCCCATGAAGCTTTCAGTAAACTCTGGGAACTTTGC
TGCCGGTGGCTGAAGCCAGAAATGCGTTCCAAGGAGCAAATACTTGAGCTGCTGGTGATTGAGCAGTTTC
TCACCATTTTACCCGAGAAGATTCAGGCTTGGGCACAGAAGCAGTGTCCGCAAAGTGGAGAGGAAGCGGT
GGCCCTGGTAGTGCATTTGGAGAAAGAGACTGGAAGACTAAGACAGCAGGTCAGCAGTCCCGTGCACCGG
GAGAAGCACTCCCCACTTGGAGCAGCGTGGGAGGTGGCAGACTTCCAGCCAGAGCAGGTGGAGACCCAAC
CCAGGGCGGTGTCTCGGGAGGAACCTGGAAGCCTCCACTCAGGACACCAGGAACAGCTGAACCGAAAGCG
AGAACGTCGGCCCTTACCCAAGAATGCTCGGCCTTCTCCCTGGGTTCCTGCCCTTGCTGATGAATGGAAT
ACCCTAGATCAGGAAGTGACAACCACACGGCTTCCTGCTGGGTCCCAGGAACCAGTGAAAGATGTCCACG
TGGCCAGAGGCTTTTCCTACAGAAAGAGTGTGCATCAGATTCCTGCCCAAAGGGACCTCTACCGGGATTT
CAGGAAGGAGAATGTTGGGAACGTGGTCTCCCTGGGAAGTGCAGTGTCTACATCTAACAAGATAACCCGG
TTGGAACAGAGAAAGGAGCCATGGACTCTAGGTCTGCATTCCTCTAACAAGAGAAGTATCCTACGAAGCA
ACTACGTCAAGGAAAAGTCAGTTCATGCTATTCAGGTCCCTGCAAGGAGTGCAGGAAAAACATGGAGAGA
GCAGCAGCAGTGGGGTTTAGAAGATGAAAAGATAGCAGGTGTGCATTGGAGCTATGAGGAAACAAAGACT
TTCCTGGCAATTCTCAAAGAGTCTCGCTTTTATGAAACACTTCAGGCCTGTCCCCGAAATAGCCAAGTGT
ATGGTGCTGTGGCTGAATGGTTGCGAGAATGTGGCTTCCTTAGAACCCCAGAACAGTGTCGAACCAAGTT
CAAAAGTCTCCAGAAAAGCTATCGAAAGGTGAGAAATGGCCACATGCTAGAACCCTGCGCCTTCTTTGAG
GACATGGATGCTTTGTTGAACCCTGCAGCCCGTGCTCCGTCCACTGATAAACCAAAGGAGATGATACCTG
TCCCCAGACTGAAGAGAATTGCCATCAGTGCTAAGGAACACATCAGCTTGGTGGAGGAGGAGGAAGCTGC
AGAAGATTCTGATGATGATGAAATAGGCATCGAATTTATCCGCAAGTCTGAAATCCATGGTGCCCCTGTC
TTGTTTCAGAATCTCAGTGGCGTGCACTGGGGCTATGAAGAAACCAAGACTTTTCTTGATATCCTCCGTG
AGACTCGGTTTTATGAAGCGCTTCAAGCCTGTCATCGGAAGAGCAAATTGTATGGGGCTGTAGCTGAACA
GCTTCGAGAGTGCGGCTTCCTCCGGACACCAGAACAGTGCCGAACCAAGTTCAAAAGCCTTCAGAAGAGT
TACCGCAAGGTGAAAAATGGCCACGTGCTAGAGTCCTGCGCGTTCTACAAGGAGATGGATGCCCTGATTA
ACTCTCGGGCATCTGCTCCTTCCCCCAGCACCCCAGAGGAAGTCCCATCACCTTCAAGGCAAGAAAGAGG
GGGTATTGAGGTTGAACCCCAGGAACCTACAGGCTGGGAACCTGAAGAGACCTCACAGGAGGCAGTAATA
GAAGACTCTTGCAGTGAGAGAATGAGCGAGGAGGAAATTGTGCAAGAGCCAGAGTTCCAGGGACCTCCAG
GTCTACTGCAGAGCCCAAATGATTTTGAAATCGGAAGTAGCATCAAGGAGGATCCAACACAGATAGTATA
TAAGGACATGGAACAGCATAGGGCATTAATAGAAAAGTCTAAAAGAGTTGTTTCCCAGAGTACCGACCCC
AGCAAATATCGCAAAAGGGAATGCATCTCAGGAAGACAATGGGAAAATCTTCAAGGAATTAGACAGGGAA
AGCCGATGTCTCAGCCTAGAGATTTAGGGAAAGCCGTTGTGCATCAGAGGCCTTTTGTGGGGAAGAGACC
CTACAGACTTCTCAAATATGGAGAAAGCTTTGGAAGGAGCACTCGTCTGATGTGCCGGATGACCCACCAC
AAGGAGAATCCTTACAAGTGTGGTGTCTGTGGGAAGTGCTTTGGTAGAAGCAGGAGCCTGATCAGACACC
AAAGAATCCACACAGGCGAAAAACCTTTTAAATGTCTTGACTGTGGAAAAAGCTTTAATGACTCCTCAAA
TTTTGGTGCCCACCAGAGAATCCACACAGGAGAGAAACCCTACAGATGCGGAGAGTGTGGAAAATGCTTT
AGTCAGAGCTCTAGTCTTATTATACATCAGAGAACGCACACCGGTGAGAAGCCCTATCAGTGTGGAGAGT
GTGGGAAAAGTTTCACCAACAGTTCTCATTTCAGCGCCCACCGGAGAGTTCACACTGGGGAGAATCCCTA
CAAATGTGTGGACTGTGAAAAAAGTTTCAATAACTGTACGAGATTTCGAGAACATCGGAGAATACACACT
GGAGAGAAGCCCTATGGATGTGCCCAGTGTGGCAAACGTTTCAGTAAGAGTTCTGTTCTTACCAAACATC
GGGAAGTTCATGTGAGAGAAAAGCCTCTGCCACACCCTCCATCTCTGTATTGCCCTGAGAACCCACATAA
GGGAAAGACTGATGAATTTAGGAAAACTTTTTGA

Translation (967 aa):
MAVALDSQIDAPLEVEGCLIMKVEKDPEWASEPILEGSDSSETFRKCFRQFCYEDVTGPHEAFSKLWELC
CRWLKPEMRSKEQILELLVIEQFLTILPEKIQAWAQKQCPQSGEEAVALVVHLEKETGRLRQQVSSPVHR
EKHSPLGAAWEVADFQPEQVETQPRAVSREEPGSLHSGHQEQLNRKRERRPLPKNARPSPWVPALADEWN
TLDQEVTTTRLPAGSQEPVKDVHVARGFSYRKSVHQIPAQRDLYRDFRKENVGNVVSLGSAVSTSNKITR
LEQRKEPWTLGLHSSNKRSILRSNYVKEKSVHAIQVPARSAGKTWREQQQWGLEDEKIAGVHWSYEETKT
FLAILKESRFYETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHMLEPCAFFE
DMDALLNPAARAPSTDKPKEMIPVPRLKRIAISAKEHISLVEEEEAAEDSDDDEIGIEFIRKSEIHGAPV
LFQNLSGVHWGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQKS
YRKVKNGHVLESCAFYKEMDALINSRASAPSPSTPEEVPSPSRQERGGIEVEPQEPTGWEPEETSQEAVI
EDSCSERMSEEEIVQEPEFQGPPGLLQSPNDFEIGSSIKEDPTQIVYKDMEQHRALIEKSKRVVSQSTDP
SKYRKRECISGRQWENLQGIRQGKPMSQPRDLGKAVVHQRPFVGKRPYRLLKYGESFGRSTRLMCRMTHH
KENPYKCGVCGKCFGRSRSLIRHQRIHTGEKPFKCLDCGKSFNDSSNFGAHQRIHTGEKPYRCGECGKCF
SQSSSLIIHQRTHTGEKPYQCGECGKSFTNSSHFSAHRRVHTGENPYKCVDCEKSFNNCTRFREHRRIHT
GEKPYGCAQCGKRFSKSSVLTKHREVHVREKPLPHPPSLYCPENPHKGKTDEFRKTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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