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Report for CCDS10095.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10095.2 Public Homo sapiens 15 ZSCAN29 24 110 108 CCDS HistoryNCBI Gene:146050Re-query CCDS DB by CCDS ID:10095.2Re-query CCDS DB by GeneID:146050See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10095.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396976.6 ENSP00000380174.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396976.6Link to Ensembl Protein Viewer:ENSP00000380174.2Re-query CCDS DB by Nucleotide ID:ENST00000396976Re-query CCDS DB by Protein ID:ENSP00000380174
Original member Current member EBI ENST00000684362.1 ENSP00000507363.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684362.1Link to Ensembl Protein Viewer:ENSP00000507363.1Re-query CCDS DB by Nucleotide ID:ENST00000684362Re-query CCDS DB by Protein ID:ENSP00000507363
Original member Current member NCBI NM_001372080.1 NP_001359009.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001372080.1Link to Protein Sequence:NP_001359009.1Re-query CCDS DB by Nucleotide ID:NM_001372080Re-query CCDS DB by Protein ID:NP_001359009Link to BLAST:NP_001359009.1
Original member Current member NCBI NM_152455.4 NP_689668.3 Accepted alive Link to Nucleotide Sequence:NM_152455.4Link to Protein Sequence:NP_689668.3Re-query CCDS DB by Nucleotide ID:NM_152455Re-query CCDS DB by Protein ID:NP_689668Link to BLAST:NP_689668.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001359009.1 852 Q8IWY8-1 852 100% 0 0
NP_689668.3 852 Q8IWY8-1 852 100% 0 0

Chromosomal Locations for CCDS 10095.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43361073 43361941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43363915 43364382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43366110 43366808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43368923 43369127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43369596 43369913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2559 nt):
ATGATGGCCAAATCAGCTCTAAGAGAGAATGGCACTAACTCTGAGACCTTCCGACAGCGTTTCAGGAGAT
TCCATTACCAGGAGGTGGCTGGGCCGCGGGAGGCTTTCAGCCAACTCTGGGAACTTTGCTGTCGGTGGCT
AAGGCCGGAGGTGCGCACCAAGGAGCAGATTGTAGAACTGTTGGTGCTAGAGCAGTTCCTGACCGTCTTA
CCTGGGGAGATCCAGAATTGGGTACAGGAACAATGTCCAGAAAATGGAGAGGAGGCAGTGACTCTCGTGG
AAGATTTAGAAAGAGAGCCTGGAAGACCTAGATCTTCGGTCACAGTCTCTGTGAAGGGGCAGGAAGTGCG
CTTGGAGAAGATGACACCCCCGAAATCATCACAAGAGTTATTAAGTGTTCGGCAGGAGTCAGTGGAACCC
CAGCCCAGGGGTGTACCCAAGAAAGAGAGGGCAAGAAGCCCAGACCTGGGACCACAGGAGCAGATGAACC
CAAAGGAGAAGCTCAAACCTTTTCAAAGGAGCGGATTGCCATTTCCTAAATCCGGTGTGGTCTCCAGGTT
GGAGCAAGGAGAGCCATGGATCCCAGATCTGCTGGGCTCTAAGGAGAAAGAACTTCCAAGTGGCAGCCAC
ATAGGAGACAGACGAGTGCATGCTGATCTGTTACCATCCAAGAAAGATAGAAGAAGCTGGGTGGAACAGG
ATCACTGGAGCTTTGAAGATGAGAAGGTGGCAGGTGTGCACTGGGGCTATGAAGAGACCAGAACGCTCCT
CGCAATTCTCAGCCAGACTGAGTTTTATGAGGCTCTCAGAAACTGCCATAGGAACAGCCAAGTGTATGGG
GCTGTGGCTGAGCGGCTCAGGGAATATGGCTTCCTCCGGACCCTGGAACAGTGTCGGACCAAGTTCAAAG
GTCTCCAGAAGAGCTATCGGAAAGTCAAGAGCGGCCACCCACCTGAGACCTGCCCCTTCTTTGAAGAGAT
GGAAGCCCTGATGAGTGCTCAGGTCATTGCCCTGCCCAGTAATGGCCTGGAAGCAGCAGCCTCTCACTCT
GGCCTGGTAGGCAGCGATGCTGAGACTGAAGAGCCAGGGCAGAGGGGCTGGCAGCATGAGGAGGGAGCAG
AAGAGGCTGTGGCTCAGGAGTCTGACAGTGATGACATGGATCTAGAGGCGACCCCCCAGGACCCCAACTC
AGCTGCACCTGTTGTGTTCAGAAGCCCAGGTGGTGTACACTGGGGCTATGAAGAGACCAAGACTTACCTT
GCAATTCTTAGTGAGACCCAGTTTTATGAAGCCCTCCGGAACTGTCACCGCAACAGCCAGCTGTATGGAG
CAGTGGCTGAGAGGTTATGGGAATATGGCTTTCTTAGGACCCCAGAACAGTGTCGGACCAAGTTTAAAAG
CCTGCAAACCAGCTATCGGAAAGTTAAGAATGGCCAGGCACCAGAGACCTGTCCCTTCTTTGAAGAGATG
GATGCTTTGGTGAGTGTCCGGGTTGCTGCCCCACCCAATGATGGCCAGGAAGAGACTGCTTCTTGCCCCG
TCCAGGGGACCAGTGAGGCTGAAGCTCAGAAGCAAGCTGAGGAAGCAGACGAGGCCACAGAGGAAGATTC
TGATGATGATGAAGAGGATACTGAGATACCCCCAGGGGCTGTCATAACCCGTGCTCCAGTGTTATTCCAA
AGCCCCCGTGGTTTTGAAGCTGGATTTGAGAATGAAGATAATTCAAAACGGGATATTTCTGAGGAAGTAC
AACTGCATAGGACATTACTTGCAAGATCTGAAAGGAAAATTCCCCGGTATCTTCATCAGGGTAAAGGCAA
TGAGAGTGACTGTAGATCAGGAAGACAGTGGGCAAAGACCTCAGGGGAGAAAAGAGGAAAACTGACACTC
CCGGAGAAGAGCTTAAGTGAAGTCCTAAGTCAACAGAGACCTTGCTTGGGAGAGAGACCCTATAAATATC
TCAAATACAGCAAAAGCTTTGGTCCAAACTCCCTTCTCATGCATCAGGTATCCCACCAGGTGGAAAATCC
ATATAAATGTGCTGATTGTGGGAAAAGCTTCAGTCGGAGTGCACGACTCATTAGACACCGGAGAATCCAC
ACTGGAGAGAAACCTTATAAATGTCTTGACTGTGGAAAAAGTTTCCGTGACAGTTCAAATTTCATCACCC
ATAGGAGAATCCACACAGGAGAGAAACCTTATCAATGTGGTGAGTGTGGGAAATGCTTCAATCAGAGCTC
AAGCCTTATCATTCACCAGAGAACCCACACAGGAGAAAAGCCCTATCAATGTGAAGAGTGTGGAAAAAGC
TTCAATAACAGTTCTCATTTTAGTGCACATCGGAGGATACACACAGGAGAGAGACCCCATGTGTGTCCTG
ACTGTGGAAAGAGTTTCAGTAAGAGTTCTGACTTACGTGCACATCATAGAACCCACACAGGAGAGAAACC
CTATGGGTGTCATGACTGTGGTAAGTGCTTCAGTAAAAGCTCTGCCCTTAATAAGCACGGAGAAATCCAT
GCACGGGAAAAGCTTCTGACACAGTCAGCTCCCAAGTAA

Translation (852 aa):
MMAKSALRENGTNSETFRQRFRRFHYQEVAGPREAFSQLWELCCRWLRPEVRTKEQIVELLVLEQFLTVL
PGEIQNWVQEQCPENGEEAVTLVEDLEREPGRPRSSVTVSVKGQEVRLEKMTPPKSSQELLSVRQESVEP
QPRGVPKKERARSPDLGPQEQMNPKEKLKPFQRSGLPFPKSGVVSRLEQGEPWIPDLLGSKEKELPSGSH
IGDRRVHADLLPSKKDRRSWVEQDHWSFEDEKVAGVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYG
AVAERLREYGFLRTLEQCRTKFKGLQKSYRKVKSGHPPETCPFFEEMEALMSAQVIALPSNGLEAAASHS
GLVGSDAETEEPGQRGWQHEEGAEEAVAQESDSDDMDLEATPQDPNSAAPVVFRSPGGVHWGYEETKTYL
AILSETQFYEALRNCHRNSQLYGAVAERLWEYGFLRTPEQCRTKFKSLQTSYRKVKNGQAPETCPFFEEM
DALVSVRVAAPPNDGQEETASCPVQGTSEAEAQKQAEEADEATEEDSDDDEEDTEIPPGAVITRAPVLFQ
SPRGFEAGFENEDNSKRDISEEVQLHRTLLARSERKIPRYLHQGKGNESDCRSGRQWAKTSGEKRGKLTL
PEKSLSEVLSQQRPCLGERPYKYLKYSKSFGPNSLLMHQVSHQVENPYKCADCGKSFSRSARLIRHRRIH
TGEKPYKCLDCGKSFRDSSNFITHRRIHTGEKPYQCGECGKCFNQSSSLIIHQRTHTGEKPYQCEECGKS
FNNSSHFSAHRRIHTGERPHVCPDCGKSFSKSSDLRAHHRTHTGEKPYGCHDCGKCFSKSSALNKHGEIH
AREKLLTQSAPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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