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Report for CCDS21945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21945.1 Public Mus musculus 7 Mgmt 23 108 98 CCDS HistoryNCBI Gene:17314Re-query CCDS DB by CCDS ID:21945.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21945.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081510.3 ENSMUSP00000080224.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081510.3Link to Ensembl Protein Viewer:ENSMUSP00000080224.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000081510Re-query CCDS DB by Protein ID:ENSMUSP00000080224
Original member NCBI NM_008598.2 NP_032624.1 Updated not alive Link to Nucleotide Sequence:NM_008598.2Link to Protein Sequence:NP_032624.1Re-query CCDS DB by Nucleotide ID:NM_008598Re-query CCDS DB by Protein ID:NP_032624
NCBI NM_008598.3 NP_032624.1 Updated not alive Link to Nucleotide Sequence:NM_008598.3Link to Protein Sequence:NP_032624.1Re-query CCDS DB by Nucleotide ID:NM_008598Re-query CCDS DB by Protein ID:NP_032624
Current member NCBI NM_008598.4 NP_032624.1 Accepted alive Link to Nucleotide Sequence:NM_008598.4Link to Protein Sequence:NP_032624.1Re-query CCDS DB by Nucleotide ID:NM_008598Re-query CCDS DB by Protein ID:NP_032624Link to BLAST:NP_032624.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032624.1 211 P26187 211 100% 0 0

Chromosomal Locations for CCDS 21945.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 136951280 136951404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 137085949 137086109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 137121489 137121628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 137127885 137128094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGGCTGAGACCTGCAAAATGAAATACTCAGTGTTGGACAGCCCTTTGGGGAAGATGGAGCTGTCTGGCT
GTGAGCGAGGCCTGCATGGGATACGGTTGCTCAGTGGGAAGACCCCAAACACTGACCCCACAGAGGCCCC
AGCTACTCCTGAGGTGCTCGGTGGGCCAGAGGGAGTTCCAGAGCCTCTGGTGCAGTGCACAGCCTGGCTG
GAAGCCTATTTCCGTGAACCCGCAGCCACAGAGGGGCTTCCCTTGCCTGCTCTCCATCACCCTGTGTTCC
AGCAAGATTCATTCACCAGACAGGTGTTATGGAAGCTGCTGAAGGTTGTGAAATTCGGAGAAACGGTTTC
TTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATGAGAAGC
AATCCGGTCCCCATCCTCATCCCCTGCCACAGGGTGGTTCGCAGTGACGGTGCCATCGGCCATTACTCCG
GAGGAGGGCAGGCTGTGAAGGAGTGGCTTCTGGCCCATGAGGGCATCCCGACCGGACAGCCAGCCTCCAA
GGGCTTGGGTCTGACTGGGACCTGGCTCAAGTCATCCTTCGAGTCGACCAGCTCTGAGCCGTCTGGCCGA
AATTGA

Translation (211 aa):
MAETCKMKYSVLDSPLGKMELSGCERGLHGIRLLSGKTPNTDPTEAPATPEVLGGPEGVPEPLVQCTAWL
EAYFREPAATEGLPLPALHHPVFQQDSFTRQVLWKLLKVVKFGETVSYQQLAALAGNPKAARAVGGAMRS
NPVPILIPCHRVVRSDGAIGHYSGGGQAVKEWLLAHEGIPTGQPASKGLGLTGTWLKSSFESTSSEPSGR
N


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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