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Report for CCDS5780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5780.1 Public Homo sapiens 7 WNT16 24 110 108 CCDS HistoryNCBI Gene:51384Re-query CCDS DB by CCDS ID:5780.1Re-query CCDS DB by GeneID:51384See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361301.6 ENSP00000355065.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361301.6Link to Ensembl Protein Viewer:ENSP00000355065.2Re-query CCDS DB by Nucleotide ID:ENST00000361301Re-query CCDS DB by Protein ID:ENSP00000355065
Original member Current member NCBI NM_016087.2 NP_057171.2 Accepted alive Link to Nucleotide Sequence:NM_016087.2Link to Protein Sequence:NP_057171.2Re-query CCDS DB by Nucleotide ID:NM_016087Re-query CCDS DB by Protein ID:NP_057171Link to BLAST:NP_057171.2

Chromosomal Locations for CCDS 5780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 121325416 121325480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 121329567 121329817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 121331678 121331964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 121338881 121339345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGCAGCTCACCACTTGCCTCAGGGAGACCCTCTTCACAGGGGCTTCTCAAAAGACCTCCCTATGGTGGT
TGGGCATTGCCTCCTTCGGGGTTCCAGAGAAGCTGGGCTGCGCCAATTTGCCGCTGAACAGCCGCCAGAA
GGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCGAGCATCCGAGAGGGCGCCCGGCTGGGCATTCAGGAG
TGCGGGAGCCAGTTCAGACACGAGAGATGGAACTGCATGATCACCGCCGCCGCCACTACCGCCCCGATGG
GCGCCAGCCCCCTCTTTGGCTACGAGCTGAGCAGCGGCACCAAAGAGACAGCATTTATTTATGCTGTGAT
GGCTGCAGGCCTGGTGCATTCTGTGACCAGGTCATGCAGTGCAGGCAACATGACAGAGTGTTCCTGTGAC
ACCACCTTGCAGAACGGCGGCTCAGCAAGTGAAGGCTGGCACTGGGGGGGCTGCTCCGATGATGTCCAGT
ATGGCATGTGGTTCAGCAGAAAGTTCCTAGATTTCCCCATCGGAAACACCACGGGCAAAGAAAACAAAGT
ACTATTAGCAATGAACCTACATAACAATGAAGCTGGAAGGCAGGCTGTCGCCAAGTTGATGTCAGTAGAC
TGCCGCTGCCACGGAGTTTCCGGCTCCTGTGCTGTGAAAACATGCTGGAAAACCATGTCTTCTTTTGAAA
AGATTGGCCATTTGTTGAAGGATAAATATGAAAACAGTATCCAGATATCAGACAAAACAAAGAGGAAAAT
GCGCAGGAGAGAAAAAGATCAGAGGAAAATACCAATCCATAAGGATGATCTGCTCTATGTTAATAAGTCT
CCCAACTACTGTGTAGAAGATAAGAAACTGGGAATCCCAGGGACACAAGGCAGAGAATGCAACCGTACAT
CAGAGGGTGCAGATGGCTGCAACCTCCTCTGCTGTGGCCGAGGTTACAACACCCATGTGGTCAGGCACGT
GGAGAGGTGTGAGTGTAAGTTCATCTGGTGCTGCTATGTCCGTTGCAGGAGGTGTGAAAGCATGACTGAT
GTCCACACTTGCAAGTAA

Translation (355 aa):
MQLTTCLRETLFTGASQKTSLWWLGIASFGVPEKLGCANLPLNSRQKELCKRKPYLLPSIREGARLGIQE
CGSQFRHERWNCMITAAATTAPMGASPLFGYELSSGTKETAFIYAVMAAGLVHSVTRSCSAGNMTECSCD
TTLQNGGSASEGWHWGGCSDDVQYGMWFSRKFLDFPIGNTTGKENKVLLAMNLHNNEAGRQAVAKLMSVD
CRCHGVSGSCAVKTCWKTMSSFEKIGHLLKDKYENSIQISDKTKRKMRRREKDQRKIPIHKDDLLYVNKS
PNYCVEDKKLGIPGTQGRECNRTSEGADGCNLLCCGRGYNTHVVRHVERCECKFIWCCYVRCRRCESMTD
VHTCK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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