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Report for CCDS3791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3791.1 Public Homo sapiens 4 NPY2R 24 110 108 CCDS HistoryNCBI Gene:4887Re-query CCDS DB by CCDS ID:3791.1Re-query CCDS DB by GeneID:4887See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329476.4 ENSP00000332591.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329476.4Link to Ensembl Protein Viewer:ENSP00000332591.3Re-query CCDS DB by Nucleotide ID:ENST00000329476Re-query CCDS DB by Protein ID:ENSP00000332591
Original member Current member EBI ENST00000506608.1 ENSP00000426366.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506608.1Link to Ensembl Protein Viewer:ENSP00000426366.1Re-query CCDS DB by Nucleotide ID:ENST00000506608Re-query CCDS DB by Protein ID:ENSP00000426366
Original member Current member NCBI NM_000910.4 NP_000901.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000910.4Link to Protein Sequence:NP_000901.1Re-query CCDS DB by Nucleotide ID:NM_000910Re-query CCDS DB by Protein ID:NP_000901Link to BLAST:NP_000901.1
Original member Current member NCBI NM_001370180.1 NP_001357109.1 Accepted alive Link to Nucleotide Sequence:NM_001370180.1Link to Protein Sequence:NP_001357109.1Re-query CCDS DB by Nucleotide ID:NM_001370180Re-query CCDS DB by Protein ID:NP_001357109Link to BLAST:NP_001357109.1
Original member Current member NCBI NM_001375470.1 NP_001362399.1 Accepted alive Link to Nucleotide Sequence:NM_001375470.1Link to Protein Sequence:NP_001362399.1Re-query CCDS DB by Nucleotide ID:NM_001375470Re-query CCDS DB by Protein ID:NP_001362399Link to BLAST:NP_001362399.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000901.1 381 P49146 381 100% 0 0
NP_001357109.1 381 P49146 381 100% 0 0
NP_001362399.1 381 P49146 381 100% 0 0

Chromosomal Locations for CCDS 3791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 155213940 155215085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGGTCCAATAGGTGCAGAGGCTGATGAGAACCAGACAGTGGAAGAAATGAAGGTGGAACAATACGGGC
CACAAACAACTCCTAGAGGTGAACTGGTCCCTGACCCTGAGCCAGAGCTTATAGATAGTACCAAGCTGAT
TGAGGTACAAGTTGTTCTCATATTGGCCTACTGCTCCATCATCTTGCTTGGGGTAATTGGCAACTCCTTG
GTGATCCATGTGGTGATCAAATTCAAGAGCATGCGCACAGTAACCAACTTTTTCATTGCCAATCTGGCTG
TGGCAGATCTTTTGGTGAACACTCTGTGTCTACCGTTCACTCTTACCTATACCTTAATGGGGGAGTGGAA
AATGGGTCCTGTCCTGTGCCACCTGGTGCCCTATGCCCAGGGCCTGGCAGTACAAGTATCCACAATCACC
TTGACAGTAATTGCCCTGGACCGGCACAGGTGCATCGTCTACCACCTAGAGAGCAAGATCTCCAAGCGAA
TCAGCTTCCTGATTATTGGCTTGGCCTGGGGCATCAGTGCCCTGCTGGCAAGTCCCCTGGCCATCTTCCG
GGAGTATTCGCTGATTGAGATCATCCCGGACTTTGAGATTGTGGCCTGTACTGAAAAGTGGCCTGGCGAG
GAGAAGAGCATCTATGGCACTGTCTATAGTCTTTCTTCCTTGTTGATCTTGTATGTTTTGCCTCTGGGCA
TTATATCATTTTCCTACACTCGCATTTGGAGTAAATTGAAGAACCATGTCAGTCCTGGAGCTGCAAATGA
CCACTACCATCAGCGAAGGCAAAAAACCACCAAAATGCTGGTGTGTGTGGTGGTGGTGTTTGCGGTCAGC
TGGCTGCCTCTCCATGCCTTCCAGCTTGCCGTTGACATTGACAGCCAGGTCCTGGACCTGAAGGAGTACA
AACTCATCTTCACAGTGTTCCACATCATCGCCATGTGCTCCACTTTTGCCAATCCCCTTCTCTATGGCTG
GATGAACAGCAACTACAGAAAGGCTTTCCTCTCGGCCTTCCGCTGTGAGCAGCGGTTGGATGCCATTCAC
TCTGAGGTGTCCGTGACATTCAAGGCTAAAAAGAACCTGGAGGTCAGAAAGAACAGTGGCCCCAATGACT
CTTTCACAGAGGCTACCAATGTCTAA

Translation (381 aa):
MGPIGAEADENQTVEEMKVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSL
VIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTIT
LTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGE
EKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSPGAANDHYHQRRQKTTKMLVCVVVVFAVS
WLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIH
SEVSVTFKAKKNLEVRKNSGPNDSFTEATNV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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