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Report for CCDS46880.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46880.2 Public Homo sapiens 3 ABI3BP 24 110 108 CCDS HistoryNCBI Gene:25890Re-query CCDS DB by CCDS ID:46880.2Re-query CCDS DB by GeneID:25890See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 46880.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284322.10 ENSP00000284322.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000284322.10Link to Ensembl Protein Viewer:ENSP00000284322.6Re-query CCDS DB by Nucleotide ID:ENST00000284322Re-query CCDS DB by Protein ID:ENSP00000284322
Original member Current member NCBI NM_015429.4 NP_056244.3 Accepted alive Link to Nucleotide Sequence:NM_015429.4Link to Protein Sequence:NP_056244.3Re-query CCDS DB by Nucleotide ID:NM_015429Re-query CCDS DB by Protein ID:NP_056244Link to BLAST:NP_056244.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056244.3 1068 Q7Z7G0-1 1068 100% 0 0

Chromosomal Locations for CCDS 46880.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 100750495 100750610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100751552 100751674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100752787 100752948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100753819 100753848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100754612 100754691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100765841 100765949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100770743 100770952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100774605 100774673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100775207 100775335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100778284 100778376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100780132 100780209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100789454 100789516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100792691 100792768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100794923 100795003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100796409 100796468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100804792 100804866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100808161 100808235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100846372 100846446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100847602 100847673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100848801 100848875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100850045 100850119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100850660 100850734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100851875 100851940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100862311 100862385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100864833 100864907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100866879 100866956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100874841 100874933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100875508 100875579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100876512 100876560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100885536 100885588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100886142 100886323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100898762 100898894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100902618 100902686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100926302 100926481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100993306 100993384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3207 nt):
ATGCTCTCCAGTTTGGGGTGTCTACTTCTCTGTGGAAGTATTACACTAGCCCTGGGAAATGCACAGAAAT
TGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTT
CTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAAC
CAGTACTTCCCTCTTCCCGCTGAAGGGAAATTCACAGAAGCTATAGTTGATGCAGAGCCGAAATATCTGA
TAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTCAGGTAAAACTCGTTCTCGCAAACC
TCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCTGTCCTGGGGTTTCCTCATCAACCCA
CACCATGACTGGACATTGCCAAGTCACTGTCCCAATGACAGATTTTATACAATTCGCTATCGAGAAAAGG
ATAAAGAAAAGAAGTGGATTTTTCAAATCTGTCCAGCCACTGAAACAATTGTGGAAAACCTAAAGCCCAA
CACAGTTTATGAATTTGGAGTGAAAGACAATGTGGAAGGTGGAATTTGGAGTAAGATTTTCAATCACAAG
ACTGTTGTTGGAAGTAAAAAAGTAAATGGGAAAATCCAAAGTACCTATGACCAAGACCACACAGTGCCAG
CATATGTCCCAAGGAAACTAATCCCAATAACAATCATCAAGCAAGTGATTCAGAATGTTACTCACAAGGA
TTCAGCTAAATCCCCAGAAAAAGCTCCACTGGGAGGAGTGATACTAGTCCACCTTATTATTCCAGGTCTT
AATGAAACTACTGTAAAACTTCCTGCATCCCTAATGTTTGAGATTTCAGATGCACTCAAGACACAATTAG
CTAAGAATGAAACCTTGGCATTACCTGCCGAATCTAAAACACCAGAGGTTGAAAAAATCTCAGCACGACC
CACAACAGTGACTCCTGAAACAGTTCCAAGAAGCACTAAACCCACTACGTCTAGTGCATTAGATGTTTCA
GAAACAACACTGGCTTCAAGTGAAAAGCCATGGATTGTGCCTACAGCTAAAATATCTGAAGATTCCAAAG
TTCTGCAGCCTCAAACTGCAACTTATGATGTTTTCTCAAGCCCTACAACATCAGATGAGCCTGAGATATC
AGATTCCTACACAGCAACAAGTGATCGTATTCTGGATTCTATCCCACCTAAAACTTCTAGAACTCTTGAA
CAGCCAAGGGCAACACTGGCTCCAAGTGAAACACCATTTGTTCCTCAAAAACTGGAAATCTTTACCAGTC
CAGAAATGCAGCCTACGACACCTGCTCCCCAGCAAACTACATCTATCCCTTCTACACCTAAACGACGCCC
CCGGCCCAAACCGCCAAGAACCAAACCTGAAAGAACCACAAGTGCCGGAACAATTACACCTAAAATTTCT
AAAAGCCCTGAACCTACATGGACAACACCGGCTCCCGGTAAAACACAATTTATTTCTCTGAAACCTAAAA
TCCCTCTCAGCCCAGAAGTGACACACACCAAACCTGCTCCCAAGCAGACACCACGTGCTCCTCCTAAGCC
AAAAACATCACCACGCCCAAGAATCCCACAAACACAACCAGTTCCTAAGGTGCCCCAGCGTGTTACTGCA
AAACCAAAAACGTCACCAAGTCCAGAAGTGTCATACACCACACCTGCTCCAAAAGATGTGCTCCTTCCTC
ATAAACCATACCCTGAGGTCTCTCAGAGCGAACCTGCTCCTCTAGAGACACGAGGCATCCCTTTTATACC
CATGATTTCCCCAAGTCCTAGTCAAGAGGAACTACAGACCACTCTGGAAGAAACAGACCAATCCACCCAA
GAACCTTTCACAACTAAGATTCCACGAACAACTGAACTAGCAAAGACAACTCAGGCGCCACACAGATTTT
ATACTACTGTGAGGCCCAGAACATCTGACAAGCCACACATCAGACCTGGGGTCAAGCAAGCACCCAGGCC
ATCAGGTGCTGATAGAAATGTATCAGTGGACTCTACCCACCCCACTAAAAAGCCAGGGACTCGCCGCCCA
CCCTTGCCACCCAGACCTACACACCCACGAAGAAAACCTTTACCACCAAATAATGTCACTGGAAAGCCAG
GAAGTGCAGGAATCATTTCATCAGGCCCAATAACTACACCACCCCTGAGGTCAACACCCAGGCCTACTGG
AACTCCCTTGGAGAGAATAGAGACAGATATAAAGCAACCAACAGTTCCTGCCTCTGGAGAAGAACTGGAA
AATATAACTGACTTTAGCTCAAGCCCAACAAGAGAAACTGATCCTCTTGGGAAGCCAAGATTCAAAGGAC
CTCATGTGCGATACATCCAAAAGCCTGACAACAGTCCCTGCTCCATTACTGACTCTGTCAAACGGTTCCC
CAAAGAGGAGGCCACAGAGGGGAATGCCACCAGCCCACCACAGAACCCACCCACCAACCTCACTGTGGTC
ACCGTGGAAGGGTGCCCCTCATTTGTCATCTTGGACTGGGAAAAGCCACTAAATGACACTGTCACTGAAT
ATGAAGTTATATCCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGTCCATTCAAATGACAAATCAGAC
ATTTTCCACAGTAGAAAATCTGAAACCAAACACGAGTTATGAATTCCAGGTGAAACCCAAAAACCCGCTT
GGTGAAGGCCCGGTCAGCAACACAGTGGCATTCAGTACTGAATCAGCGGACCCAAGAGTGAGTGAGCCAG
TTTCTGCAGGAAGAGATGCCATCTGGACTGAAAGACCCTTTAATTCAGACTCTTACTCAGAGTGTAAGGG
CAAACAATATGTCAAAAGGACATGGTATAAAAAATTTGTAGGAGTGCAGCTGTGCAACTCTCTCAGATAC
AAGATTTACTTGAGCGACTCCCTCACAGGAAAATTTTATAACATAGGTGATCAGAGGGGCCATGGAGAAG
ATCACTGCCAGTTTGTGGATTCATTTTTAGATGGACGCACTGGGCAGCAACTCACTTCTGACCAGTTACC
AATCAAAGAAGGTTATTTCAGAGCAGTTCGCCAGGAACCTGTCCAATTTGGAGAAATAGGTGGTCACACC
CAAATCAATTATGTTCAGTGGTATGAATGTGGGACTACAATTCCTGGAAAATGGTAG

Translation (1068 aa):
MLSSLGCLLLCGSITLALGNAQKLPKGKRPNLKVHINTTSDSILLKFLRPSPNVKLEGLLLGYGSNVSPN
QYFPLPAEGKFTEAIVDAEPKYLIVVRPAPPPSQKKSCSGKTRSRKPLQLVVGTLTPSSVFLSWGFLINP
HHDWTLPSHCPNDRFYTIRYREKDKEKKWIFQICPATETIVENLKPNTVYEFGVKDNVEGGIWSKIFNHK
TVVGSKKVNGKIQSTYDQDHTVPAYVPRKLIPITIIKQVIQNVTHKDSAKSPEKAPLGGVILVHLIIPGL
NETTVKLPASLMFEISDALKTQLAKNETLALPAESKTPEVEKISARPTTVTPETVPRSTKPTTSSALDVS
ETTLASSEKPWIVPTAKISEDSKVLQPQTATYDVFSSPTTSDEPEISDSYTATSDRILDSIPPKTSRTLE
QPRATLAPSETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKIS
KSPEPTWTTPAPGKTQFISLKPKIPLSPEVTHTKPAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTA
KPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQTTLEETDQSTQ
EPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSVDSTHPTKKPGTRRP
PLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGEELE
NITDFSSSPTRETDPLGKPRFKGPHVRYIQKPDNSPCSITDSVKRFPKEEATEGNATSPPQNPPTNLTVV
TVEGCPSFVILDWEKPLNDTVTEYEVISRENGSFSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPKNPL
GEGPVSNTVAFSTESADPRVSEPVSAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVGVQLCNSLRY
KIYLSDSLTGKFYNIGDQRGHGEDHCQFVDSFLDGRTGQQLTSDQLPIKEGYFRAVRQEPVQFGEIGGHT
QINYVQWYECGTTIPGKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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