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Report for CCDS40435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40435.1 Public Mus musculus 8 Mt4 23 108 98 CCDS HistoryNCBI Gene:17752Re-query CCDS DB by CCDS ID:40435.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40435.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034207.7 ENSMUSP00000034207.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034207.7Link to Ensembl Protein Viewer:ENSMUSP00000034207.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034207Re-query CCDS DB by Protein ID:ENSMUSP00000034207
Original member Current member NCBI NM_008631.3 NP_032657.1 Accepted alive Link to Nucleotide Sequence:NM_008631.3Link to Protein Sequence:NP_032657.1Re-query CCDS DB by Nucleotide ID:NM_008631Re-query CCDS DB by Protein ID:NP_032657Link to BLAST:NP_032657.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032657.1 62 P47945 62 100% 0 0

Chromosomal Locations for CCDS 40435.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 94137242 94137272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94138231 94138296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94138776 94138867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (189 nt):
ATGGACCCTGGGGAATGCACGTGTATGTCTGGAGGGATCTGCATCTGCGGAGATAATTGCAAATGCACAA
CCTGCAGCTGTAAAACCTGTCGTAAAAGCTGCTGTCCCTGCTGTCCCCCAGGCTGTGCCAAGTGTGCCCG
GGGCTGCATCTGCAAAGGGGGTTCAGACAAGTGCAGCTGCTGTCCCTGA

Translation (62 aa):
MDPGECTCMSGGICICGDNCKCTTCSCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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