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Report for CCDS45394.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45394.1 Public Homo sapiens 16 IL32 24 110 108 CCDS HistoryNCBI Gene:9235Re-query CCDS DB by CCDS ID:45394.1Re-query CCDS DB by GeneID:9235See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45394.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000008180.13 ENSP00000008180.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000008180.13Link to Ensembl Protein Viewer:ENSP00000008180.9Re-query CCDS DB by Nucleotide ID:ENST00000008180Re-query CCDS DB by Protein ID:ENSP00000008180
Original member Current member EBI ENST00000530890.5 ENSP00000433747.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530890.5Link to Ensembl Protein Viewer:ENSP00000433747.1Re-query CCDS DB by Nucleotide ID:ENST00000530890Re-query CCDS DB by Protein ID:ENSP00000433747
Original member Current member EBI ENST00000552356.5 ENSP00000446978.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552356.5Link to Ensembl Protein Viewer:ENSP00000446978.1Re-query CCDS DB by Nucleotide ID:ENST00000552356Re-query CCDS DB by Protein ID:ENSP00000446978
Original member Current member NCBI NM_001012634.4 NP_001012652.1 Accepted alive Link to Nucleotide Sequence:NM_001012634.4Link to Protein Sequence:NP_001012652.1Re-query CCDS DB by Nucleotide ID:NM_001012634Re-query CCDS DB by Protein ID:NP_001012652Link to BLAST:NP_001012652.1
Original member Current member NCBI NM_001012635.4 NP_001012653.1 Accepted alive Link to Nucleotide Sequence:NM_001012635.4Link to Protein Sequence:NP_001012653.1Re-query CCDS DB by Nucleotide ID:NM_001012635Re-query CCDS DB by Protein ID:NP_001012653Link to BLAST:NP_001012653.1
Original member Current member NCBI NM_001369591.3 NP_001356520.1 Accepted alive Link to Nucleotide Sequence:NM_001369591.3Link to Protein Sequence:NP_001356520.1Re-query CCDS DB by Nucleotide ID:NM_001369591Re-query CCDS DB by Protein ID:NP_001356520Link to BLAST:NP_001356520.1
Original member Current member NCBI NM_001369592.3 NP_001356521.1 Accepted alive Link to Nucleotide Sequence:NM_001369592.3Link to Protein Sequence:NP_001356521.1Re-query CCDS DB by Nucleotide ID:NM_001369592Re-query CCDS DB by Protein ID:NP_001356521Link to BLAST:NP_001356521.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012652.1 168 P24001-5 168 100% 0 0
NP_001012653.1 168 P24001-5 168 100% 0 0
NP_001356520.1 168 P24001-5 168 100% 0 0
NP_001356521.1 168 P24001-5 168 100% 0 0

Chromosomal Locations for CCDS 45394.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3065812 3065826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067377 3067415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067984 3068010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3068180 3068239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3068990 3069355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGTGCTTCCCGAAGGTCCTCTCTGATGACATGAAGAAGCTGAAGGCCCGAATGGTGATGTCGAGCCTGG
CAGAGCTGGAGGACGACTTCAAAGAGGGCTACCTGGAGACAGTGGCGGCTTATTATGAGGAGCAGCACCC
AGAGCTCACTCCTCTACTTGAAAAAGAAAGAGATGGATTACGGTGCCGAGGCAACAGATCCCCTGTCCCG
GATGTTGAGGATCCCGCAACCGAGGAGCCTGGGGAGAGCTTTTGTGACAAGGTCATGAGATGGTTCCAGG
CCATGCTGCAGCGGCTGCAGACCTGGTGGCACGGGGTTCTGGCCTGGGTGAAGGAGAAGGTGGTGGCCCT
GGTCCATGCAGTGCAGGCCCTCTGGAAACAGTTCCAGAGTTTCTGCTGCTCTCTGTCAGAGCTCTTCATG
TCCTCTTTCCAGTCCTACGGAGCCCCACGGGGGGACAAGGAGGAGCTGACACCCCAGAAGTGCTCTGAAC
CCCAATCCTCAAAATGA

Translation (168 aa):
MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVP
DVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFM
SSFQSYGAPRGDKEELTPQKCSEPQSSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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