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Report for CCDS4234.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4234.1 Public Homo sapiens 5 NDUFA2 24 110 108 CCDS HistoryNCBI Gene:4695Re-query CCDS DB by CCDS ID:4234.1Re-query CCDS DB by GeneID:4695See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4234.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252102.9 ENSP00000252102.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252102.9Link to Ensembl Protein Viewer:ENSP00000252102.5Re-query CCDS DB by Nucleotide ID:ENST00000252102Re-query CCDS DB by Protein ID:ENSP00000252102
Original member Current member NCBI NM_002488.5 NP_002479.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002488.5Link to Protein Sequence:NP_002479.1Re-query CCDS DB by Nucleotide ID:NM_002488Re-query CCDS DB by Protein ID:NP_002479Link to BLAST:NP_002479.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002479.1 99 O43678-1 99 100% 0 0

Chromosomal Locations for CCDS 4234.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 140645587 140645678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 140647256 140647362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 140647483 140647583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGGCGGCGGCCGCAGCAAGTCGAGGAGTCGGGGCAAAGCTGGGCCTGCGTGAGATTCGCATCCACTTAT
GTCAGCGCTCGCCCGGCAGCCAGGGCGTCAGGGACTTCATTGAGAAACGCTACGTGGAGCTGAAGAAGGC
GAATCCCGACCTACCCATCCTAATCCGCGAATGCTCCGATGTGCAGCCCAAGCTCTGGGCCCGCTACGCA
TTTGGCCAAGAGACGAATGTCCCTTTGAACAACTTCAGTGCTGATCAGGTAACCAGAGCCCTGGAGAACG
TTCTAAGTGGTAAAGCCTGA

Translation (99 aa):
MAAAAASRGVGAKLGLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA
FGQETNVPLNNFSADQVTRALENVLSGKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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