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Report for CCDS937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
937.1 Public Homo sapiens 1 H2AC20 24 110 108 CCDS HistoryNCBI Gene:8338Re-query CCDS DB by CCDS ID:937.1Re-query CCDS DB by GeneID:8338See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 937.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331380.4 ENSP00000332194.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331380.4Link to Ensembl Protein Viewer:ENSP00000332194.3Re-query CCDS DB by Nucleotide ID:ENST00000331380Re-query CCDS DB by Protein ID:ENSP00000332194
Original member Current member NCBI NM_003517.3 NP_003508.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003517.3Link to Protein Sequence:NP_003508.1Re-query CCDS DB by Nucleotide ID:NM_003517Re-query CCDS DB by Protein ID:NP_003508Link to BLAST:NP_003508.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003508.1 129 Q16777 129 100% 0 0

Chromosomal Locations for CCDS 937.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 149886975 149887364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGTCTGGTCGTGGCAAACAAGGAGGCAAGGCCCGCGCCAAGGCCAAGTCGCGCTCGTCCCGCGCTGGCC
TCCAGTTCCCGGTAGGGCGAGTGCACCGCTTGCTGCGCAAAGGCAACTACGCGGAGCGGGTGGGGGCCGG
CGCGCCCGTCTACATGGCGGCGGTCCTCGAGTACCTGACCGCCGAGATCCTGGAGCTGGCGGGCAACGCG
GCTCGGGACAACAAGAAGACGCGCATCATCCCTCGTCACCTCCAGCTGGCCATCCGCAACGACGAGGAAC
TGAACAAGCTGCTGGGCAAAGTCACCATCGCCCAGGGCGGCGTTTTGCCTAACATCCAGGCCGTTCTGTT
ACCAAAGAAAACCGAAAGCCACAAAGCCAAAAGCAAATAA

Translation (129 aa):
MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNA
ARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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