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Report for CCDS54062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54062.1 Public Homo sapiens 17 WDR81 24 110 108 CCDS HistoryNCBI Gene:124997Re-query CCDS DB by CCDS ID:54062.1Re-query CCDS DB by GeneID:124997See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54062.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409644.6 ENSP00000386609.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409644.6Link to Ensembl Protein Viewer:ENSP00000386609.1Re-query CCDS DB by Nucleotide ID:ENST00000409644Re-query CCDS DB by Protein ID:ENSP00000386609
Original member Current member NCBI NM_001163809.2 NP_001157281.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001163809.2Link to Protein Sequence:NP_001157281.1Re-query CCDS DB by Nucleotide ID:NM_001163809Re-query CCDS DB by Protein ID:NP_001157281Link to BLAST:NP_001157281.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157281.1 1941 Q562E7-1 1941 100% 0 0

Chromosomal Locations for CCDS 54062.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 1724960 1728626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1730380 1730487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1730755 1730945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1731068 1731258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1732325 1732490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1732666 1732831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1733527 1734216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1735572 1735717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1736039 1736218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1737365 1737685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5826 nt):
ATGGCCCAGGGCAGCGGGGGGCGGGAAGGCGCTCTCAGAACCCCGGCCGGGGGCTGGCATTCCCCGCCAA
GCCCAGACATGCAGGAGCTGCTCCGGAGCGTGGAGAGGGACCTGAGCATCGATCCCAGGCAGCTGGCTCC
GGCCCCGGGGGGCACCCACGTGGTGGCCCTAGTGCCTGCGCGCTGGCTGGCCAGCCTCCGCGATCGCCGG
CTGCCCCTGGGACCCTGTCCCCGCGCAGAGGGCCTGGGAGAAGCGGAAGTCAGGACTCTCCTGCAGCGCT
CTGTGCAAAGGCTGCCTGCCGGCTGGACGCGCGTGGAGGTGCATGGGCTGCGGAAGCGGAGACTGTCCTA
CCCTCTGGGCGGGGGCCTGCCCTTTGAGGACGGGTCCTGCGGCCCTGAGACCCTCACTCGCTTCATGCAG
GAGGTTGCCGCCCAGAATTATCGCAACCTGTGGCGCCATGCATACCACACTTACGGCCAGCCGTACAGTC
ACAGCCCTGCCCCCTCAGCTGTCCCTGCCTTGGACTCAGTACGGCAGGCTCTGCAGAGGGTCTATGGTTG
CTCCTTCCTGCCAGTGGGTGAAACTACCCAATGCCCTTCATATGCCAGAGAAGGCCCCTGCCCCCCTCGG
GGCAGCCCTGCTTGCCCTAGTCTTTTACGGGCTGAGGCCTTGCTGGAGTCGCCGGAGATGCTGTATGTGG
TACACCCTTACGTACAGTTCTCCCTACATGACGTGGTCACCTTCAGCCCTGCCAAGCTGACCAACAGCCA
GGCCAAGGTGCTGTTCATTCTCTTCCGCGTGCTGAGGGCTATGGACGCCTGTCACCGCCAGGGGCTGGCG
TGTGGGGCCCTGTCTTTGTATCACATCGCAGTGGATGAGAAGCTTTGCAGCGAGCTGCGACTGGACCTGA
GTGCTTATGAGAGGCCCGAGGAGGACGAGAATGAGGAGGCCCCTGTGGCAAGGGATGAGGCGGGCATTGT
GTCTCAAGAGGAGCAGGGAGGGCAACCTGGGCAACCCACTGGCCAGGAGGAACTTCGGAGCCTCGTGCTA
GATTGGGTCCACGGCCGCATCAGCAACTTCCACTACCTCATGCAGCTGAATCGGTTGGCAGGTCGGCGGC
AGGGGGACCCCAACTACCACCCCGTGCTGCCCTGGGTGGTGGACTTCACTACGCCCCATGGGCGCTTCCG
AGACCTGCGCAAGTCCAAGTTCCGCCTCAACAAGGGGGATAAGCAACTGGACTTCACGTATGAGATGACA
CGGCAGGCATTCGTAGCAGGCGGGGCGGGCGGCGGGGAACCCCCTCATGTTCCCCACCACATCTCAGACG
TGCTCTCCGACATCACGTACTATGTGTACAAGGCTCGGCGCACGCCTCGGTCGGTGCTCTGCGGACACGT
CCGCGCGCAGTGGGAGCCCCATGAGTATCCGGCCAGCATGGAGCGGATGCAGAACTGGACCCCGGATGAG
TGCATTCCGGAGTTCTACACCGATCCCTCTATCTTCCGCTCCATCCACCCCGACATGCCTGACCTGGATG
TGCCAGCCTGGTGCAGCTCCAGCCAGGAGTTCGTAGCTGCCCACCGAGCCCTGCTGGAGAGCCGCGAGGT
ATCCCGGGACCTGCACCATTGGATCGACCTCACGTTTGGCTATAAACTCCAGGGTAAGGAGGCTGTCAAG
GAAAAGAATGTGTGTCTGCACCTGGTGGACGCCCACACTCACCTGGCCAGCTACGGGGTGGTGCAGCTCT
TCGATCAGCCACACCCCCAGCGCCTGGCTGGGGCTCCTGCCCTTGCCCCCGAGCCTCCCCTCATCCCCAA
GCTGTTGGTCCAGACCATCCAGGAGACCACAGGCCGGGAGGACTTCACGGAAAACCCGGGACAGCTTCCA
AATGGAGTGGGCCGGCCAGTTTTAGAGGCCACTCCCTGTGAGGCTAGCTGGACCAGAGACAGGCCGGTGG
CAGGAGAAGACGACTTGGAACAGGCCACAGAAGCTCTGGATTCCATTTCCCTTGCTGGGAAAGCAGGTGA
CCAGCTGGGCTCCTCCAGTCAAGCGTCCCCTGGACTTCTCTCTTTCTCAGTGGCCTCAGCCTCCCGTCCA
GGCCGCAGGAATAAAGCTGCTGGGGCAGACCCTGGGGAGGGTGAGGAGGGGAGGATTCTTCTTCCCGAGG
GCTTCAATCCCATGCAGGCCCTGGAGGAGCTGGAGAAAACGGGCAACTTCTTGGCCAAAGGCCTAGGGGG
CCTGTTGGAGGTGCCTGAGCAGCCCCGGGTCCAGCCGGCTGTGCCACTGCAGTGCCTACTCCACAGGGAC
ATGCAGGCGCTGGGTGTCCTATTGGCAGAGATGGTGTTTGCCACCAGGGTGCGGACGCTGCAGCCCGATG
CACCTTTGTGGGTACGCTTCCAGGCTGTCCGAGGGCTCTGCACGCGCCACCCCAAGGAGGTCCCTGTGTC
TTTGCAGCCCGTGCTGGACACACTCCTGCAGATGAGTGGCCCCGAAGTCCCCATGGGAGCAGAGAGGGGC
AAGCTGGACCAACTGTTTGAGTACAGGCCTGTCTCCCAGGGCCTGCCCCCACCCTGCCCAAGCCAGCTTC
TCAGCCCCTTCAGCTCCGTGGTTCCCTTCCCACCCTACTTCCCGGCACTGCACAGATTCATCCTCCTGTA
CCAGGCAAGGCGTGTGGAGGACGAGGCCCAGGGGCGCGAGCTGGTGTTTGCTCTGTGGCAGCAGCTGGGC
GCGGTGCTGAAGGACATCACCCCTGAGGGCCTGGAGATCCTGCTGCCCTTCGTGCTCTCACTCATGTCCG
AGGAGCACACAGCTGTGTACACGGCCTGGTATCTGTTTGAGCCTGTTGCCAAGGCACTGGGCCCCAAAAA
TGCCAATAAGTACCTCCTGAAGCCGCTCATTGGTGCCTACGAGAGCCCCTGCCAGCTACACGGCCGCTTC
TACCTGTACACGGACTGCTTTGTGGCCCAGCTGATGGTGCGGCTGGGCCTGCAGGCATTTCTCACTCACC
TGCTGCCCCATGTCCTGCAGGTGCTGGCGGGCGCAGAGGCCTCCCAGGAGGAGAGCAAGGACCTGGCAGG
GGCTGCTGAGGAGGAGGAGAGCGGGCTGCCCGGGGCCGGGCCTGGCTCCTGTGCTTTTGGGGAGGAGATT
CCCATGGATGGGGAGCCTCCTGCCTCCTCGGGCCTGGGGCTCCCAGACTACACGTCTGGCGTCAGCTTCC
ACGACCAGGCTGACCTCCCTGAGACAGAGGACTTCCAAGCCGGGCTCTATGTGACTGAGTCTCCCCAGCC
CCAGGAGGCTGAGGCTGTGAGCCTGGGCCGGCTGAGTGACAAGAGCAGCACCAGCGAGACCTCCCTGGGT
GAGGAGCGGGCTCCAGACGAGGGGGGTGCCCCCGTGGACAAGAGCAGCCTTCGATCAGGTGACAGCAGCC
AGGACTTGAAGCAAAGCGAGGGCTCCGAGGAGGAAGAGGAGGAGGAGGACAGCTGCGTGGTGCTAGAGGA
GGAGGAGGGGGAGCAGGAGGAGGTCACCGGGGCATCTGAGCTCACTCTGTCTGACACGGTGCTGTCCATG
GAGACGGTTGTGGCCGGCGGCAGTGGGGGAGATGGAGAAGAAGAGGAGGAGGCACTGCCTGAGCAGTCAG
AAGGCAAAGAACAGAAGATCCTCCTTGATACAGCCTGCAAGATGGTCCGCTGGCTGTCTGCCAAGCTCGG
CCCCACAGTGGCCTCTCGCCACGTGGCCCGGAACCTGCTCCGCCTGCTGACGTCTTGTTATGTTGGACCC
ACTCGGCAGCAGTTCACAGTGAGCAGTGGCGAGAGCCCACCGCTGAGCGCCGGCAACATCTACCAGAAGA
GGCCGGTCCTGGGCGACATCGTGTCAGGGCCTGTGCTCAGCTGCCTCCTCCACATCGCCCGCCTGTATGG
GGAGCCTGTCCTCACCTACCAGTACCTGCCCTACATCAGCTACCTGGTGGCCCCAGGGAGTGCCTCAGGC
CCCAGCCGACTGAACAGCCGTAAGGAGGCGGGGCTGCTGGCCGCGGTGACGCTGACTCAGAAGATCATCG
TGTACCTCTCAGACACCACACTCATGGACATCCTGCCCCGGATCAGCCATGAGGTCCTGCTGCCCGTGCT
CAGCTTCCTCACCTCCCTCGTCACGGGGTTCCCAAGTGGGGCCCAGGCTCGGACCATCCTGTGTGTGAAA
ACCATCAGCCTCATCGCCCTCATCTGCCTGCGCATTGGACAGGAGATGGTCCAGCAGCACCTGAGCGAGC
CCGTGGCCACCTTTTTCCAGGTCTTCTCTCAGCTGCATGAGCTTCGGCAACAGGATCTGAAGCTGGACCC
TGCGGGCCGTGGTGAGGGCCAGCTGCCACAGGTGGTCTTCTCTGATGGGCAGCAGCGGCCCGTGGACCCC
GCCCTGCTGGACGAGCTGCAGAAGGTGTTCACCCTGGAGATGGCATACACAATCTACGTGCCCTTCTCCT
GCCTGTTGGGTGACATCATCCGGAAAATCATCCCCAACCACGAGCTGGTTGGGGAGCTGGCGGCGCTGTA
CTTGGAGAGCATCAGCCCCAGCAGTCGCAACCCTGCCAGCGTGGAGCCCACCATGCCCGGCACCGGGCCC
GAGTGGGACCCCCATGGTGGGGGCTGCCCTCAGGATGACGGCCACTCAGGGACCTTTGGGAGCGTCCTGG
TGGGGAACCGCATTCAGATCCCCAATGACTCTCGGCCTGAGAACCCCGGACCACTGGGCCCCATCTCGGG
GGTGGGTGGCGGGGGCCTGGGCAGCGGGAGCGACGACAACGCCCTGAAGCAGGAGCTGCCGCGGAGCGTG
CACGGGCTGAGCGGAAACTGGCTGGCGTACTGGCAGTACGAGATCGGCGTGAGCCAGCAGGATGCCCACT
TTCACTTCCACCAGATCCGCCTGCAGAGCTTCCCGGGCCACTCGGGGGCCGTCAAGTGCGTGGCACCCCT
AAGCAGCGAGGACTTCTTCCTGAGCGGCAGCAAGGATCGTACCGTGCGCCTCTGGCCGCTGTACAACTAC
GGCGACGGGACCAGCGAGACGGCCCCACGCCTCGTCTACACCCAGCACCGCAAGAGCGTCTTCTTCGTGG
GCCAGCTTGAGGCCCCGCAGCACGTGGTGAGCTGTGACGGGGCTGTGCACGTCTGGGACCCCTTCACAGG
GAAGACCCTTCGCACAGTGGAGCCGCTGGACAGCCGGGTGCCCCTGACTGCGGTGGCTGTCATGCCCGCC
CCCCACACCAGCATCACCATGGCCAGCTCTGACTCTACCCTGCGCTTTGTGGACTGCAGGAAGCCTGGTC
TGCAGCACGAGTTCCGACTGGGCGGTGGGCTGAACCCTGGGCTTGTCCGTGCCCTGGCCATCAGCCCCAG
TGGCCGTAGTGTCGTGGCCGGCTTCTCCTCAGGCTTCATGGTGCTCCTGGACACCCGCACAGGCCTGGTT
CTGCGAGGCTGGCCAGCCCACGAGGGGGACATTCTGCAGATCAAGGCGGTGGAGGGCAGCGTCCTGGTCA
GCTCCTCCTCTGACCATTCCTTGACCGTCTGGAAGGAGCTGGAGCAGAAGCCCACCCATCACTACAAGTC
AGCATCCGACCCCATCCACACCTTTGACCTGTACGGCAGCGAGGTGGTCACTGGCACCGTGTCCAACAAG
ATTGGCGTCTGCTCCCTGCTTGAGCCACCCTCGCAGGCCACCACGAAGCTCAGCTCTGAGAACTTCCGCG
GCACGCTCACCAGCCTGGCCTTGCTGCCCACTAAACGCCACCTCCTGCTGGGCTCAGACAACGGGGTTAT
CCGCCTCCTGGCATAG

Translation (1941 aa):
MAQGSGGREGALRTPAGGWHSPPSPDMQELLRSVERDLSIDPRQLAPAPGGTHVVALVPARWLASLRDRR
LPLGPCPRAEGLGEAEVRTLLQRSVQRLPAGWTRVEVHGLRKRRLSYPLGGGLPFEDGSCGPETLTRFMQ
EVAAQNYRNLWRHAYHTYGQPYSHSPAPSAVPALDSVRQALQRVYGCSFLPVGETTQCPSYAREGPCPPR
GSPACPSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLRAMDACHRQGLA
CGALSLYHIAVDEKLCSELRLDLSAYERPEEDENEEAPVARDEAGIVSQEEQGGQPGQPTGQEELRSLVL
DWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWVVDFTTPHGRFRDLRKSKFRLNKGDKQLDFTYEMT
RQAFVAGGAGGGEPPHVPHHISDVLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDE
CIPEFYTDPSIFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGKEAVK
EKNVCLHLVDAHTHLASYGVVQLFDQPHPQRLAGAPALAPEPPLIPKLLVQTIQETTGREDFTENPGQLP
NGVGRPVLEATPCEASWTRDRPVAGEDDLEQATEALDSISLAGKAGDQLGSSSQASPGLLSFSVASASRP
GRRNKAAGADPGEGEEGRILLPEGFNPMQALEELEKTGNFLAKGLGGLLEVPEQPRVQPAVPLQCLLHRD
MQALGVLLAEMVFATRVRTLQPDAPLWVRFQAVRGLCTRHPKEVPVSLQPVLDTLLQMSGPEVPMGAERG
KLDQLFEYRPVSQGLPPPCPSQLLSPFSSVVPFPPYFPALHRFILLYQARRVEDEAQGRELVFALWQQLG
AVLKDITPEGLEILLPFVLSLMSEEHTAVYTAWYLFEPVAKALGPKNANKYLLKPLIGAYESPCQLHGRF
YLYTDCFVAQLMVRLGLQAFLTHLLPHVLQVLAGAEASQEESKDLAGAAEEEESGLPGAGPGSCAFGEEI
PMDGEPPASSGLGLPDYTSGVSFHDQADLPETEDFQAGLYVTESPQPQEAEAVSLGRLSDKSSTSETSLG
EERAPDEGGAPVDKSSLRSGDSSQDLKQSEGSEEEEEEEDSCVVLEEEEGEQEEVTGASELTLSDTVLSM
ETVVAGGSGGDGEEEEEALPEQSEGKEQKILLDTACKMVRWLSAKLGPTVASRHVARNLLRLLTSCYVGP
TRQQFTVSSGESPPLSAGNIYQKRPVLGDIVSGPVLSCLLHIARLYGEPVLTYQYLPYISYLVAPGSASG
PSRLNSRKEAGLLAAVTLTQKIIVYLSDTTLMDILPRISHEVLLPVLSFLTSLVTGFPSGAQARTILCVK
TISLIALICLRIGQEMVQQHLSEPVATFFQVFSQLHELRQQDLKLDPAGRGEGQLPQVVFSDGQQRPVDP
ALLDELQKVFTLEMAYTIYVPFSCLLGDIIRKIIPNHELVGELAALYLESISPSSRNPASVEPTMPGTGP
EWDPHGGGCPQDDGHSGTFGSVLVGNRIQIPNDSRPENPGPLGPISGVGGGGLGSGSDDNALKQELPRSV
HGLSGNWLAYWQYEIGVSQQDAHFHFHQIRLQSFPGHSGAVKCVAPLSSEDFFLSGSKDRTVRLWPLYNY
GDGTSETAPRLVYTQHRKSVFFVGQLEAPQHVVSCDGAVHVWDPFTGKTLRTVEPLDSRVPLTAVAVMPA
PHTSITMASSDSTLRFVDCRKPGLQHEFRLGGGLNPGLVRALAISPSGRSVVAGFSSGFMVLLDTRTGLV
LRGWPAHEGDILQIKAVEGSVLVSSSSDHSLTVWKELEQKPTHHYKSASDPIHTFDLYGSEVVTGTVSNK
IGVCSLLEPPSQATTKLSSENFRGTLTSLALLPTKRHLLLGSDNGVIRLLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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