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Report for CCDS793.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
793.1 |
Public |
Homo sapiens |
1 |
CLCC1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23155](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:793.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23155](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 793.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000369970.8 |
ENSP00000358987.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000369970.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000358987.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000369970](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000358987](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000686434.1 |
ENSP00000508570.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000686434.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508570.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000686434](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508570](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000685628.1 |
ENSP00000509075.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000685628.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000509075.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000685628](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000509075](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000687226.1 |
ENSP00000509162.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000687226.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000509162.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000687226](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000509162](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000687734.1 |
ENSP00000510543.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000687734.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510543.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000687734](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510543](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015127.5 |
NP_055942.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015127.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055942.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015127](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055942](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055942.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_055942.1 |
501 |
Q96S66-2 |
501 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 793.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1506 nt): ATGCTGTGTTCTTTGCTCCTTTGTGAATGTCTGTTGCTGGTAGCTGGTTATGCTCATGATGATGACTGGA TTGACCCCACAGACATGCTTAACTATGATGCTGCTTCAGGAACAATGAGAAAATCTCAGGCAAAATATGG TATTTCAGGGGAAAAGGATGTCAGTCCTGACTTGTCATGTGCTGATGAAATATCAGAATGTTATCACAAA CTTGATTCTTTAACTTATAAGATTGATGAGTGTGAAAAGAAAAAGAGGGAAGACTATGAAAGTCAAAGCA ATCCTGTTTTTAGGAGATACTTAAATAAGATTTTAATTGAAGCTGGAAAGCTTGGACTTTTTCATGATTT TGAAACATGGAAGTGGCGATTCGAAGATTCCTTTGGAGTGGATCCATATAATGTGTTAATGGTACTTCTT TGTCTGCTCTGCATCGTGGTTTTAGTGGCTACTGAGCTGTGGACATATGTACGTTGGTACACTCAGTTGA GACGTGTTTTAATCATCAGCTTTCTGTTCAGTTTGGGATGGAATTGGATGTATTTATATAAGCTAGCTTT TGCACAGCATCAGGCTGAAGTCGCCAAGATGGAGCCATTAAACAATGTGTGTGCCAAAAAGATGGACTGG ACTGGAAGTATCTGGGAATGGTTTAGAAGTTCATGGACCTATAAGGATGACCCATGCCAAAAATACTATG AGCTCTTACTAGTCAACCCTATTTGGTTGGTCCCACCAACAAAGGCACTTGCAGTTACATTCACCACATT TGTAACGGAGCCATTGAAGCATATTGGAAAAGGAACTGGGGAATTTATTAAAGCACTCATGAAGGAAATT CCAGCGCTGCTTCATCTTCCAGTGCTGATAATTATGGCATTAGCCATCCTGAGTTTCTGCTATGGTGCTG GAAAATCAGTTCATGTGCTGAGACATATAGGCGGTCCTGAGAGCGAACCTCCCCAGGCACTTCGGCCACG GGATAGAAGACGGCAGGAGGAAATTGATTATAGACCTGATGGTGGAGCAGGTGATGCCGATTTCCATTAT AGGGGCCAAATGGGCCCCACTGAGCAAGGCCCTTATGCCAAAACGTATGAGGGTAGAAGAGAGATTTTGA GAGAGAGAGATGTTGACTTGAGATTTCAGACTGGCAACAAGAGCCCTGAAGTGCTCCGGGCATTTGATGT ACCAGACGCAGAGGCACGAGAGCATCCCACGGTGGTACCCAGTCATAAATCACCTGTTTTGGATACAAAG CCCAAGGAGACAGGTGGAATCCTGGGGGAAGGCACACCGAAAGAAAGCAGTACTGAAAGCAGCCAGTCGG CCAAGCCTGTCTCTGGCCAAGACACATCAGGGAATACAGAAGGTTCACCCGCAGCGGAAAAGGCCCAGCT CAAGTCTGAAGCCGCAGGCAGCCCAGACCAAGGCAGCACATACAGCCCCGCAAGAGGTGTGGCTGGACCA CGTGGACAGGATCCGGTCAGCAGCCCCTGTGGCTAG
Translation (501 aa): MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSCADEISECYHK LDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLFHDFETWKWRFEDSFGVDPYNVLMVLL CLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQHQAEVAKMEPLNNVCAKKMDW TGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKHIGKGTGEFIKALMKEI PALLHLPVLIIMALAILSFCYGAGKSVHVLRHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHY RGQMGPTEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTK PKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP RGQDPVSSPCG
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