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Report for CCDS30699.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30699.1 Public Homo sapiens 1 DYNLT4 24 110 108 CCDS HistoryNCBI Gene:343521Re-query CCDS DB by CCDS ID:30699.1Re-query CCDS DB by GeneID:343521See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30699.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339355.3 ENSP00000341803.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339355.3Link to Ensembl Protein Viewer:ENSP00000341803.2Re-query CCDS DB by Nucleotide ID:ENST00000339355Re-query CCDS DB by Protein ID:ENSP00000341803
Original member Current member EBI ENST00000675259.1 ENSP00000501642.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675259.1Link to Ensembl Protein Viewer:ENSP00000501642.1Re-query CCDS DB by Nucleotide ID:ENST00000675259Re-query CCDS DB by Protein ID:ENSP00000501642
Original member Current member NCBI NM_001013632.4 NP_001013654.1 Accepted alive Link to Nucleotide Sequence:NM_001013632.4Link to Protein Sequence:NP_001013654.1Re-query CCDS DB by Nucleotide ID:NM_001013632Re-query CCDS DB by Protein ID:NP_001013654Link to BLAST:NP_001013654.1
Original member Current member NCBI NM_001377534.1 NP_001364463.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001377534.1Link to Protein Sequence:NP_001364463.1Re-query CCDS DB by Nucleotide ID:NM_001377534Re-query CCDS DB by Protein ID:NP_001364463Link to BLAST:NP_001364463.1
Original member Current member NCBI NM_001377535.1 NP_001364464.1 Accepted alive Link to Nucleotide Sequence:NM_001377535.1Link to Protein Sequence:NP_001364464.1Re-query CCDS DB by Nucleotide ID:NM_001377535Re-query CCDS DB by Protein ID:NP_001364464Link to BLAST:NP_001364464.1
Original member Current member NCBI NM_001377536.1 NP_001364465.1 Accepted alive Link to Nucleotide Sequence:NM_001377536.1Link to Protein Sequence:NP_001364465.1Re-query CCDS DB by Nucleotide ID:NM_001377536Re-query CCDS DB by Protein ID:NP_001364465Link to BLAST:NP_001364465.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013654.1 221 Q5JR98 221 100% 0 0
NP_001364463.1 221 Q5JR98 221 100% 0 0
NP_001364464.1 221 Q5JR98 221 100% 0 0
NP_001364465.1 221 Q5JR98 221 100% 0 0

Chromosomal Locations for CCDS 30699.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44806003 44806668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGGCCAGCAGGCCTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCT
CACCGGTGCGGCCCCGAGGCTGCCTGCCCAGCATTGATGAGGCCCGACCGGCAGGTCCAGGTCCAGCCCC
GGCCTCGCGCCGGGGCTCCATGCTGGGCCTGGCCGCGTCCTTCTCCCGCCGCAACTCGCTGGTCGGGCCA
GGCGCGGGTCCTGGGGGTCAGCGGCCATCCCTGGGCCCGGTGCCCCCTCTGGGCTCAAGGGTCAGCTTCT
CAGGGTTGCCCCTGGCGCCCGCCCGTTGGGTGGCGCCCTCCTACCGCACGGAGCCAGTGCCCGGGGAGCG
CTGGGAGGCTGCGCGTGCACAGCGTGCCCTGGAGGCGGCGCTGGCCGCAGGGCTGCACGACGCGTGCTAC
TCCAGCGACGAGGCCGCGCGGCTGGTGCGGGAGCTCTGCGAGCAGGTGCACGTTCGCCTGCGCGAGCTCA
GCCCGCCACGCTACAAGCTGGTATGCAGTGTGGTGCTGGGGCCGCGCGCGGGCCAGGGCGTTCACGTGGT
CAGCCGTGCGCTCTGGGACGTGGCGCGCGATGGGCTGGCCTCGGTCTCCTACACCAACACCTCGCTCTTC
GCGGTGGCCACGGTCCACGGGCTCTACTGCGAGTGA

Translation (221 aa):
MASRPLPPGRQEEENAKDSGRKPSPVRPRGCLPSIDEARPAGPGPAPASRRGSMLGLAASFSRRNSLVGP
GAGPGGQRPSLGPVPPLGSRVSFSGLPLAPARWVAPSYRTEPVPGERWEAARAQRALEAALAAGLHDACY
SSDEAARLVRELCEQVHVRLRELSPPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLF
AVATVHGLYCE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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