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Report for CCDS7329.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7329.2 Public Homo sapiens 10 USP54 24 110 108 CCDS HistoryNCBI Gene:159195Re-query CCDS DB by CCDS ID:7329.2Re-query CCDS DB by GeneID:159195See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7329.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339859.8 ENSP00000345216.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339859.8Link to Ensembl Protein Viewer:ENSP00000345216.4Re-query CCDS DB by Nucleotide ID:ENST00000339859Re-query CCDS DB by Protein ID:ENSP00000345216
Original member Current member EBI ENST00000687698.1 ENSP00000510226.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000687698.1Link to Ensembl Protein Viewer:ENSP00000510226.1Re-query CCDS DB by Nucleotide ID:ENST00000687698Re-query CCDS DB by Protein ID:ENSP00000510226
Original member Current member NCBI NM_001391953.1 NP_001378882.1 Accepted alive Link to Nucleotide Sequence:NM_001391953.1Link to Protein Sequence:NP_001378882.1Re-query CCDS DB by Nucleotide ID:NM_001391953Re-query CCDS DB by Protein ID:NP_001378882Link to BLAST:NP_001378882.1
Original member Current member NCBI NM_001391956.1 NP_001378885.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001391956.1Link to Protein Sequence:NP_001378885.1Re-query CCDS DB by Nucleotide ID:NM_001391956Re-query CCDS DB by Protein ID:NP_001378885Link to BLAST:NP_001378885.1
Original member Current member NCBI NM_152586.4 NP_689799.3 Accepted alive Link to Nucleotide Sequence:NM_152586.4Link to Protein Sequence:NP_689799.3Re-query CCDS DB by Nucleotide ID:NM_152586Re-query CCDS DB by Protein ID:NP_689799Link to BLAST:NP_689799.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001378882.1 1684 Q70EL1-1 1684 100% 0 0
NP_001378885.1 1684 Q70EL1-1 1684 100% 0 0
NP_689799.3 1684 Q70EL1-1 1684 100% 0 0

Chromosomal Locations for CCDS 7329.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73498629 73499188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73500655 73500838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73504850 73504990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73505308 73505426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73516375 73517747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73519797 73519992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73520908 73521027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73523583 73523750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73526647 73526780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73529680 73529911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73530143 73530523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73530704 73530835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73534600 73534770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73536269 73536437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73539444 73539593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73541375 73541521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73541633 73541738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73542803 73542885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73543018 73543131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73545538 73545672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73571421 73571513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73575512 73575658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5055 nt):
ATGTCTTGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCTCGAAGCT
CAACCTCCATAGCCCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAACAGCTGCTTCCTCAACAGTGC
CCTGCAGGTTTTGTGGCACTTGGATATCTTCCGACGTAGCTTTAGGCAGCTTACAACTCACAAGTGCATG
GGAGATTCCTGCATCTTTTGCGCTCTCAAGGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAAAGTGC
TTCCATCTGACACTCTCCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGAAT
TATGGATGATGCTGCAGAGTGCTTTGAAAACCTCCTGATGAGAATTCACTTCCACATTGCTGATGAAACC
AAAGAGGATATATGTACTGCCCAACACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAGT
GTGTATGTACTAGCTGTGGTGCCACTTCTGATCCGCTGCCTTTCATCCAGATGGTACATTATATCTCCAC
CACTTCCCTTTGCAATCAGGCTATTTGTATGCTGGAAAGACGAGAGAAACCTTCACCAAGCATGTTTGGT
GAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTGTCCAAGCAACTGTGGAGAGAGGATCA
GGATTCGCCGTGTGTTGATGAATGCTCCACAGATTATCACGATTGGGCTGGTATGGGACTCAGACCACTC
AGACTTAGCAGAAGATGTTATCCACAGCCTGGGAACCTGCCTTAAGCTGGGTGATCTGTTTTTCAGAGTG
ACGGATGACCGGGCCAAGCAATCTGAACTGTACTTAGTTGGAATGATCTGTTACTATGGCAAACATTATT
CTACATTCTTTTTTCAAACAAAGATTCGCAAATGGATGTATTTTGATGATGCTCATGTCAAGGAGATTGG
GCCCAAATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCATTATCAGCCCCTGCTGCTGCTTTATGCA
GATCCCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAGGA
CATGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAGATTCCTCAAC
GGAGAGCTATCCCTACAAACATTCCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTGATTCTCAGGGG
ACAGTCATCTATAATGTGGAAAATGATTCCATGTCTCAGAGCAGTCGGGACACAGGACACCTGACTGATA
GTGAATGTAATCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCGGGT
TAGGAGGAAAGGCGATGAGCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAACACTGAAAGAGAAGCAG
GCTCCTAGAAATGCCTCCAAACCATCCAGCAGCACCAACAGGCTGAGAGATTTTAAAGAGACAGTCAGCA
ATATGATCCATAACAGACCATCCCTGGCTTCTCAGACCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGG
AGACCAGCCTGACAAAAAACCTCCTAGGACCCTGCCTTTACACTCTCGTGACTGGGAAATAGAGAGTACC
AGCAGTGAGTCAAAATCCAGTTCTTCCAGCAAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGA
ATATTGACAGTATCTTTAGTAAGGACAAAAGGAAGCACTGTGGCTATACCCAGCTTAGCCCCTTTTCTGA
GGATTCAGCTAAAGAATTTATACCAGATGAACCAAGCAAGCCACCTTCTTACGACATTAAATTTGGTGGA
CCAAGCCCCCAGTACAAGCGCTGGGGCCCAGCACGGCCAGGCTCTCACCTTTTAGAGCAGCACCCCCGAC
TAATCCAGCGAATGGAATCTGGCTATGAAAGCAGTGAGAGGAACAGCAGCAGCCCTGTCAGCCTGGATGC
AGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATCCAAGTGCTAAGAGATCAGCTGGGTTGGTTCCTTCC
TGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACAGCATCCATGGGTGGCT
GGACAAAGAGTCAGCCTTTCTCTGGTGAGGAGATATCTTCTAAAAGTGAACTGGATGAATTGCAGGAAGA
GGTGGCCAGGAGGGCGCAGGAACAGGAACTTCGAAGAAAACGGGAGAAGGAGTTAGAGGCAGCGAAAGGG
TTTAACCCTCATCCTAGCCGCTTCATGGACTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGGCTTTG
AGAGGTCCCTGCAAGAGGCAGAGTCAGTGTTTGAAGAGTCACTACATCTGGAACAGAAAGGAGACTGTGC
TGCAGCTTTGGCTCTCTGTAATGAAGCTATCTCTAAACTAAGACTTGCCCTGCATGGTGCCAGCTGTAGC
ACGCACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATC
GCATGCAGCAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACACAGGCGGGGAC
TCTCTCTCAGCCAACAAGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAA
TCCGGCATGGATACAGAGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGAGTCACACT
CATCACTATCTCCAGAGTCATCTGCCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGAAGCTTCTGAC
TTCGGTTGAAGTAGACAACATTGAACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACCAGGGTGG
ACTGAGAAGAATTCTCATCATAGTTGGGAGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGT
GTGACAACAGCAGTTGCAGCAAGCTCCCTCCACAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCA
AGAAAAGAAGGATCCTGCTAACCCCTCCCCGGTGATGCCTGGAATAGCCACCTCTGAGAGGGGTGATGAA
CACAGCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGCCCAGCCTTCCCCTGTATAGAACCTGCCACC
CCATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGTCCTGATCCTGTGCAGAAAACTAACCAATGCCT
CCAAGGCCAAAGCCTCAAAACTTCATTGACTTTAAAAGTGGACAGAGGCAGTGAGGAGACCTATAGGCCA
GAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGAGGATGCAGGGTGTCTCCA
TGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGTCAGGTAGTCTAAGGAAGAACTCTTCCCCTTCTGA
TTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACAATCCTCTCTG
GAGGGTGGGGATAGACCACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTCTTGCCTTAAACTCTGGGC
TGCCTAATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAGCT
GTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGACTTGGGGACTTCCTTGCCTTTG
GATTCCTGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGA
AGTCCTCCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAGAGAAATCACATCCTTTTGCATCCACA
TTGGAACCAAGACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCT
CAAGCTGGCTGTTCTGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAG
ATGGCATGGGGAGGAGGTTGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAATGGA
GCATGGTCTCCATGAAGCCAGAACAGTGCGTACTTCTCAGGCTACACCTTGCCGAGGCCTCAGCAGGGAG
TGTGGGGAGGATGAGCAGTACAGTGCAGAGAATTTACGTCGCATCTCACGCAGTCTCAGTGGCACCGTTG
TCTCAGAGAGGGAGGAAGCTCCGGTTTCTTCCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGA
AACCGGGCACCGTTGTTCCAGCTCCTCTTCCCTCCCTGTCATCCATGACCCTTCTGTGTTTCTCCTCGGT
CCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCCCCAGATGTCCTGATGCCCACCATGGCAGGGGAGC
CCAATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGTTTCTGGCTATGTGTGACAGGGGTGAAACTTC
CCAAGGGGCCAAGTACACAGGAAGGACTTTGAACTACCAGAGCCTCCCCCATCGCTCCAGAACAGACAAC
TCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCTGACTACTCCAGGGTGCAATC
CTCAACTAACCTACACTGCCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTCCTCACACTCAGTCCTG
GAGTGATCTTTTCCATTCACCCTCCCACCCTCCCATTGTTCATCCTGTGTACCCACCATCTAGCAGTCTT
CATGTACCCCTGAGGTCAGCTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCCTCGAAGAG
TAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAACAGT
GGGAGAGGGGTTTCTGTTTGTTCTATCAGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGTCCTGCAG
CACAGTCAATGGTAA

Translation (1684 aa):
MSWKRNYFSGGRGSVQGMFAPRSSTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQLTTHKCM
GDSCIFCALKGIFNQFQCSSEKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADET
KEDICTAQHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPSPSMFG
ELLQNASTMGDLRNCPSNCGERIRIRRVLMNAPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRV
TDDRAKQSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYA
DPQGTPVSTQDLPPQAEFQSYSRTCYDSEDSGREPSISSDTRTDSSTESYPYKHSHHESVVSHFSSDSQG
TVIYNVENDSMSQSSRDTGHLTDSECNQKHTSKKGSLIERKRSSGRVRRKGDEPQASGYHSEGETLKEKQ
APRNASKPSSSTNRLRDFKETVSNMIHNRPSLASQTNVGSHCRGRGGDQPDKKPPRTLPLHSRDWEIEST
SSESKSSSSSKYRPTWRPKRESLNIDSIFSKDKRKHCGYTQLSPFSEDSAKEFIPDEPSKPPSYDIKFGG
PSPQYKRWGPARPGSHLLEQHPRLIQRMESGYESSERNSSSPVSLDAALPESSNVYRDPSAKRSAGLVPS
WRHIPKSHSSSILEVDSTASMGGWTKSQPFSGEEISSKSELDELQEEVARRAQEQELRRKREKELEAAKG
FNPHPSRFMDLDELQNQGRSDGFERSLQEAESVFEESLHLEQKGDCAAALALCNEAISKLRLALHGASCS
THSRALVDKKLQISIRKARSLQDRMQQQQSPQQPSQPSACLPTQAGTLSQPTSEQPIPLQVLLSQEAQLE
SGMDTEFGASSFFHSPASCHESHSSLSPESSAPQHSSPSRSALKLLTSVEVDNIEPSAFHRQGLPKAPGW
TEKNSHHSWEPLDAPEGKLQGSRCDNSSCSKLPPQEGRGIAQEQLFQEKKDPANPSPVMPGIATSERGDE
HSLGCSPSNSSAQPSLPLYRTCHPIMPVASSFVLHCPDPVQKTNQCLQGQSLKTSLTLKVDRGSEETYRP
EFPSTKGLVRSLAEQFQRMQGVSMRDSTGFKDRSLSGSLRKNSSPSDSKPPFSQGQEKGHWPWAKQQSSL
EGGDRPLSWEESTEHSSLALNSGLPNGETSSGGQPRLAEPDIYQEKLSQVRDVRSKDLGSSTDLGTSLPL
DSWVNITRFCDSQLKHGAPRPGMKSSPHDSHTCVTYPERNHILLHPHWNQDTEQETSELESLYQASLQAS
QAGCSGWGQQDTAWHPLSQTGSADGMGRRLHSAHDPGLSKTSTAEMEHGLHEARTVRTSQATPCRGLSRE
CGEDEQYSAENLRRISRSLSGTVVSEREEAPVSSHSFDSSNVRKPLETGHRCSSSSSLPVIHDPSVFLLG
PQLYLPQPQFLSPDVLMPTMAGEPNRLPGTSRSVQQFLAMCDRGETSQGAKYTGRTLNYQSLPHRSRTDN
SWAPWSETNQHIGTRFLTTPGCNPQLTYTATLPERSKGLQVPHTQSWSDLFHSPSHPPIVHPVYPPSSSL
HVPLRSAWNSDPVPGSRTPGPRRVDMPPDDDWRQSSYASHSGHRRTVGEGFLFVLSDAPRREQIRARVLQ
HSQW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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