CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS33854.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
33854.1 |
Public |
Homo sapiens |
3 |
PLXND1 |
24 |
110 |
108 |
|
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 33854.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000324093.9 |
ENSP00000317128.4 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_015103.3 |
NP_055918.3 |
MANE Select |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_055918.3 |
1925 |
Q9Y4D7-1 |
1925 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 33854.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5778 nt): ATGGCTCCTCGCGCCGCGGGCGGCGCACCCCTTAGCGCCCGGGCCGCCGCCGCCAGCCCCCCGCCGTTCC AGACGCCGCCGCGGTGCCCGGTGCCGCTGCTGTTGCTGCTGCTCCTGGGGGCGGCGCGGGCCGGCGCCCT GGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACC GTGTACCTGGCGGCCGTCAACCGCCTCTATCAGCTGTCGGGCGCCAACCTGAGCCTGGAGGCCGAGGCGG CCGTGGGCCCGGTGCCCGACAGCCCGCTGTGTCACGCTCCGCAGCTGCCGCAGGCCTCGTGCGAGCACCC GCGGCGCCTCACGGACAACTACAACAAGATCCTGCAGCTGGACCCCGGCCAGGGCCTGGTAGTCGTGTGC GGGTCCATCTACCAGGGCTTCTGCCAGCTGCGGCGCCGGGGCAACATCTCGGCCGTGGCCGTGCGCTTCC CGCCCGCCGCGCCGCCCGCCGAGCCCGTCACGGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACCACCC GAACGCGTCCACCGTGGGGCTAGTTCTGCCTCCCGCCGCGGGCGCGGGGGGCAGCCGCCTGCTCGTGGGC GCCACGTACACCGGTTACGGCAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACCGCTTCGAGA ACACGCCCGAGATCGCCATCCGCTCCCTGGACACGCGCGGCGACCTGGCCAAGCTCTTCACCTTCGACCT CAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTG AGCGCCTTCCTGCACCCGTCCGACCCGCCGCCGGGTGCACAGTCCTACGCGTACCTGGCGCTCAACAGCG AGGCGCGCGCGGGCGACAAGGAGAGCCAGGCGCGGAGCCTGCTGGCGCGCATCTGCCTGCCCCACGGCGC CGGCGGCGACGCCAAGAAGCTCACCGAGTCCTACATCCAGTTGGGCTTGCAGTGCGCGGGCGGCGCGGGC CGCGGCGACCTCTACAGCCGCCTGGTGTCGGTCTTCCCAGCCCGGGAGCGGCTCTTTGCTGTCTTCGAGC GGCCCCAGGGGTCCCCCGCGGCCCGCGCTGCTCCGGCCGCACTCTGCGCCTTCCGCTTCGCCGACGTGCG AGCCGCCATCCGAGCTGCGCGCACCGCCTGCTTCGTGGAACCGGCGCCCGACGTGGTGGCGGTGCTCGAC AGCGTGGTGCAGGGCACGGGACCGGCCTGTGAGCGCAAGCTCAACATCCAGCTCCAGCCAGAGCAGCTGG ACTGTGGAGCTGCTCACCTGCAGCACCCGCTGTCCATCCTGCAGCCCCTGAAGGCCACGCCCGTGTTCCG CGCCCCGGGCCTCACCTCCGTGGCCGTGGCCAGCGTCAACAACTACACAGCGGTCTTCCTGGGCACGGTC AACGGGAGGCTTCTCAAGATCAACCTGAACGAGAGCATGCAGGTGGTGAGCAGGCGGGTGGTGACTGTGG CCTATGGGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACCTGATGAC GTCCCACCAGATGGCCAGGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCGTGGGT GCGGCGGACGCCTACTGCGGCTGGTGTGCCCTGGAGACGCGGTGCACCTTGCAGCAGGACTGCACCAATT CCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCC TTCCGAGATCGATGTGCGCCAGGAGTACCCAGGCATGATCCTGCAGATCTCGGGCAGCCTGCCCAGCCTC AGTGGCATGGAGATGGCCTGTGACTATGGGAACAACATCCGCACTGTGGCTCGGGTCCCAGGCCCTGCCT TTGGTCACCAGATTGCCTACTGCAACCTCCTGCCGAGGGACCAGTTTCCGCCCTTCCCCCCCAACCAGGA CCACGTGACTGTTGAGATGTCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTAC GACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTGTCGGCACAGTGGCCCT GTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCTCACCAAACCCCAC GAGCCCTCAGGACTGCCCCCGGACCCTGCTCTCACCCCTGGCACCCGTGCCTACGGGTGGCTCCCAGAAC ATCCTGGTGCCTCTGGCCAACACTGCCTTTTTCCAGGGTGCAGCCCTGGAGTGTAGTTTTGGGCTGGAGG AGATCTTCGAGGCTGTGTGGGTGAATGAGTCTGTTGTACGCTGTGACCAGGTGGTGCTGCACACGACCCG GAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATTCCTGGACAGCCCTGAG CCCATGACAGTCATGGTCTATAACTGTGCCATGGGCAGCCCCGACTGTTCCCAGTGCCTGGGCCGCGAAG ACCTGGGTCACCTGTGCATGTGGAGTGATGGCTGCCGCCTGCGGGGGCCTCTGCAGCCCATGGCTGGCAC CTGCCCCGCCCCCGAGATCCACGCGATTGAGCCCCTGAGTGGCCCGTTGGACGGTGGGACCCTGCTGACC ATCCGAGGAAGGAACCTGGGCCGGCGGCTCAGTGACGTGGCCCACGGCGTGTGGATTGGTGGTGTGGCCT GTGAGCCACTGCCTGACAGATACACGGTGTCGGAGGAGATCGTGTGTGTCACAGGGCCAGCCCCAGGACC ACTCTCAGGTGTGGTGACCGTGAACGCCTCTAAGGAGGGCAAGTCCCGGGACCGCTTCTCCTACGTGCTG CCCCTGGTCCACTCCCTGGAGCCTACCATGGGCCCCAAGGCCGGGGGCACCAGGATCACCATCCATGGGA ATGACCTCCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAACGACACAGACCCCTGCACGGAGCTGATGCG CACAGATACCAGCATCGCCTGCACCATGCCTGAGGGGGCCCTGCCGGCTCCGGTGCCTGTGTGTGTGCGC TTCGAGCGTCGGGGCTGCGTGCACGGCAACCTCACCTTCTGGTACATGCAGAACCCGGTCATCACGGCCA TCAGTCCCCGCCGCAGCCCTGTCAGTGGCGGCAGGACCATCACAGTGGCTGGTGAGCGTTTCCACATGGT GCAGAATGTGTCCATGGCCGTCCACCACATTGGCCGGGAGCCCACGCTCTGCAAGGTTCTCAACTCCACC CTCATCACCTGCCCGTCCCCCGGGGCCCTGAGCAACGCATCAGCGCCAGTGGACTTCTTCATCAATGGGC GGGCCTACGCAGACGAGGTGGCTGTGGCTGAGGAGCTACTGGACCCCGAGGAGGCACAGCGGGGCAGCAG GTTCCGCCTGGACTACCTCCCCAACCCACAGTTCTCTACGGCCAAGAGGGAGAAGTGGATCAAGCACCAC CCCGGGGAGCCTCTCACCCTCGTTATCCACAAGGAGCAGGACAGCCTGGGGCTCCAGAGTCACGAGTACC GGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAGAATCATCCACTGCTCGGTCAA CGAGTCCCTGGGCGCGGCCGTGGGGCAGCTGCCCATCACAATCCAGGTAGGGAACTTCAACCAGACCATC GCCACACTGCAGCTGGGGGGCAGCGAGACGGCCATCATCGTGTCCATCGTCATCTGCAGCGTCCTGCTGC TGCTCTCCGTGGTGGCCCTGTTCGTCTTCTGTACCAAGAGCCGACGTGCTGAGCGTTACTGGCAGAAGAC GCTGCTGCAGATGGAGGAGATGGAATCTCAGATCCGAGAGGAAATCCGCAAAGGCTTCGCTGAGCTGCAG ACAGACATGACAGATCTCACCAAGGAGCTGAACCGCAGCCAGGGCATCCCCTTCCTGGAGTATAAGCACT TCGTGACCCGCACCTTCTTCCCCAAGTGTTCCTCCCTTTATGAAGAGCGTTACGTGCTGCCCTCCCAGAC CCTCAACTCCCAGGGCAGCTCCCAGGCACAGGAAACCCACCCACTGCTGGGAGAGTGGAAGATTCCTGAG AGCTGCCGGCCCAACATGGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCA TCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGTGCGCGACAGGTGCAGCCTGGCCTCGCT GCTGACCATCGCGCTGCACGGCAAGCTGGAGTACTACACCAGCATCATGAAGGAGCTGCTGGTGGACCTC ATTGACGCCTCGGCCGCCAAGAACCCCAAGCTCATGCTGCGGCGCACAGAGTCTGTGGTGGAGAAGATGC TCACCAACTGGATGTCCATCTGCATGTACAGCTGTCTGCGGGAGACGGTGGGGGAGCCATTCTTCCTGCT GCTGTGTGCCATCAAGCAGCAAATCAACAAGGGCTCCATCGACGCCATCACAGGCAAGGCCCGCTACACA CTCAGTGAGGAGTGGCTGCTGCGGGAGAACATCGAGGCCAAGCCCCGGAACCTGAACGTGTCCTTCCAGG GCTGTGGCATGGACTCGCTGAGCGTGCGGGCCATGGACACCGACACGCTGACACAGGTCAAGGAGAAGAT CCTGGAGGCCTTCTGCAAGAATGTGCCCTACTCCCAGTGGCCGCGTGCAGAGGACGTCGACCTTGAGTGG TTCGCCTCCAGCACACAGAGCTACATCCTTCGGGACCTGGACGACACCTCAGTGGTGGAAGACGGCCGCA AGAAGCTTAACACGCTGGCCCATTACAAGATCCCTGAAGGTGCCTCCCTGGCCATGAGTCTCATAGACAA GAAGGACAACACACTGGGCCGAGTGAAAGACTTGGACACAGAGAAGTATTTCCATTTGGTGCTGCCTACG GACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCGCAAGAAGGTGCTCCCGGAAATCTACC TGACCCGCCTGCTCTCCACCAAGGGCACGTTGCAGAAGTTTCTGGATGACCTGTTCAAGGCCATTCTGAG TATCCGTGAAGACAAGCCCCCACTGGCTGTCAAGTACTTTTTCGACTTCCTGGAGGAGCAGGCTGAGAAG AGGGGAATCTCCGACCCCGACACCCTACACATCTGGAAGACCAACAGCCTTCCTCTCCGGTTCTGGGTGA ACATCCTGAAGAACCCCCAGTTTGTCTTTGACATCGACAAGACAGACCACATCGACGCCTGCCTTTCAGT CATCGCGCAGGCCTTCATCGACGCCTGCTCCATCTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCAAC AAGCTCCTCTACGCCAAGGAGATTCCTGAGTACCGGAAGATCGTGCAGCGCTACTACAAGCAGATCCAGG ACATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCATCTGGCCGAGGAGTCGAGGAAATACCAGAATGA GTTCAACACCAATGTGGCCATGGCAGAGATTTATAAGTACGCCAAGAGGTATCGGCCGCAGATCATGGCC GCGCTGGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGA TGGAGGACAACATCTACGAGTGCTACAGTGAGGCCTGA
Translation (1925 aa): MAPRAAGGAPLSARAAAASPPPFQTPPRCPVPLLLLLLLGAARAGALEIQRRFPSPTPTNNFALDGAAGT VYLAAVNRLYQLSGANLSLEAEAAVGPVPDSPLCHAPQLPQASCEHPRRLTDNYNKILQLDPGQGLVVVC GSIYQGFCQLRRRGNISAVAVRFPPAAPPAEPVTVFPSMLNVAANHPNASTVGLVLPPAAGAGGSRLLVG ATYTGYGSSFFPRNRSLEDHRFENTPEIAIRSLDTRGDLAKLFTFDLNPSDDNILKIKQGAKEQHKLGFV SAFLHPSDPPPGAQSYAYLALNSEARAGDKESQARSLLARICLPHGAGGDAKKLTESYIQLGLQCAGGAG RGDLYSRLVSVFPARERLFAVFERPQGSPAARAAPAALCAFRFADVRAAIRAARTACFVEPAPDVVAVLD SVVQGTGPACERKLNIQLQPEQLDCGAAHLQHPLSILQPLKATPVFRAPGLTSVAVASVNNYTAVFLGTV NGRLLKINLNESMQVVSRRVVTVAYGEPVHHVMQFDPADSGYLYLMTSHQMARVKVAACNVHSTCGDCVG AADAYCGWCALETRCTLQQDCTNSSQQHFWTSASEGPSRCPAMTVLPSEIDVRQEYPGMILQISGSLPSL SGMEMACDYGNNIRTVARVPGPAFGHQIAYCNLLPRDQFPPFPPNQDHVTVEMSVRVNGRNIVKANFTIY DCSRTAQVYPHTACTSCLSAQWPCFWCSQQHSCVSNQSRCEASPNPTSPQDCPRTLLSPLAPVPTGGSQN ILVPLANTAFFQGAALECSFGLEEIFEAVWVNESVVRCDQVVLHTTRKSQVFPLSLQLKGRPARFLDSPE PMTVMVYNCAMGSPDCSQCLGREDLGHLCMWSDGCRLRGPLQPMAGTCPAPEIHAIEPLSGPLDGGTLLT IRGRNLGRRLSDVAHGVWIGGVACEPLPDRYTVSEEIVCVTGPAPGPLSGVVTVNASKEGKSRDRFSYVL PLVHSLEPTMGPKAGGTRITIHGNDLHVGSELQVLVNDTDPCTELMRTDTSIACTMPEGALPAPVPVCVR FERRGCVHGNLTFWYMQNPVITAISPRRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTLCKVLNST LITCPSPGALSNASAPVDFFINGRAYADEVAVAEELLDPEEAQRGSRFRLDYLPNPQFSTAKREKWIKHH PGEPLTLVIHKEQDSLGLQSHEYRVKIGQVSCDIQIVSDRIIHCSVNESLGAAVGQLPITIQVGNFNQTI ATLQLGGSETAIIVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQ TDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSQTLNSQGSSQAQETHPLLGEWKIPE SCRPNMEEGISLFSSLLNNKHFLIVFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKELLVDL IDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYT LSEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEW FASSTQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLIDKKDNTLGRVKDLDTEKYFHLVLPT DELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVKYFFDFLEEQAEK RGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIAQAFIDACSISDLQLGKDSPTN KLLYAKEIPEYRKIVQRYYKQIQDMTPLSEQEMNAHLAEESRKYQNEFNTNVAMAEIYKYAKRYRPQIMA ALEANPTARRTQLQHKFEQVVALMEDNIYECYSEA
|