NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44241.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44241.1 Public Homo sapiens 1 FDPS 24 110 108 CCDS HistoryNCBI Gene:2224Re-query CCDS DB by CCDS ID:44241.1Re-query CCDS DB by GeneID:2224See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44241.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447866.5 ENSP00000391755.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447866.5Link to Ensembl Protein Viewer:ENSP00000391755.1Re-query CCDS DB by Nucleotide ID:ENST00000447866Re-query CCDS DB by Protein ID:ENSP00000391755
Original member Current member EBI ENST00000612683.1 ENSP00000478235.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612683.1Link to Ensembl Protein Viewer:ENSP00000478235.1Re-query CCDS DB by Nucleotide ID:ENST00000612683Re-query CCDS DB by Protein ID:ENSP00000478235
Original member Current member EBI ENST00000467076.5 ENSP00000480142.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000467076.5Link to Ensembl Protein Viewer:ENSP00000480142.1Re-query CCDS DB by Nucleotide ID:ENST00000467076Re-query CCDS DB by Protein ID:ENSP00000480142
Original member Current member NCBI NM_001135822.2 NP_001129294.1 Accepted alive Link to Nucleotide Sequence:NM_001135822.2Link to Protein Sequence:NP_001129294.1Re-query CCDS DB by Nucleotide ID:NM_001135822Re-query CCDS DB by Protein ID:NP_001129294Link to BLAST:NP_001129294.1
Original member Current member NCBI NM_001242824.2 NP_001229753.1 Accepted alive Link to Nucleotide Sequence:NM_001242824.2Link to Protein Sequence:NP_001229753.1Re-query CCDS DB by Nucleotide ID:NM_001242824Re-query CCDS DB by Protein ID:NP_001229753Link to BLAST:NP_001229753.1
Original member Current member NCBI NM_001378424.1 NP_001365353.1 Accepted alive Link to Nucleotide Sequence:NM_001378424.1Link to Protein Sequence:NP_001365353.1Re-query CCDS DB by Nucleotide ID:NM_001378424Re-query CCDS DB by Protein ID:NP_001365353Link to BLAST:NP_001365353.1
Original member Current member NCBI NM_001378425.1 NP_001365354.1 Accepted alive Link to Nucleotide Sequence:NM_001378425.1Link to Protein Sequence:NP_001365354.1Re-query CCDS DB by Nucleotide ID:NM_001378425Re-query CCDS DB by Protein ID:NP_001365354Link to BLAST:NP_001365354.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129294.1 353 P14324-2 353 100% 0 0
NP_001229753.1 353 P14324-2 353 100% 0 0
NP_001365353.1 353 P14324-2 353 100% 0 0
NP_001365354.1 353 P14324-2 353 100% 0 0

Chromosomal Locations for CCDS 44241.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 155310065 155310205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155312255 155312395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155317941 155318021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155318169 155318291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155318665 155318753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155318856 155318928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155319611 155319688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155319794 155319928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155320409 155320609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGAACGGAGACCAGAATTCAGATGTTTATGCCCAAGAAAAGCAGGATTTCGTTCAGCACTTCTCCCAGA
TCGTTAGGGTGCTGACTGAGGATGAGATGGGGCACCCAGAGATAGGAGATGCTATTGCCCGGCTCAAGGA
GGTCCTGGAGTACAATGCCATTGGAGGCAAGTATAACCGGGGTTTGACGGTGGTAGTAGCATTCCGGGAG
CTGGTGGAGCCAAGGAAACAGGATGCTGATAGTCTCCAGCGGGCCTGGACTGTGGGCTGGTGTGTGGAAC
TGCTGCAAGCTTTCTTCCTGGTGGCAGATGACATCATGGATTCATCCCTTACCCGCCGGGGACAGATCTG
CTGGTATCAGAAGCCGGGCGTGGGTTTGGATGCCATCAATGATGCTAACCTCCTGGAAGCATGTATCTAC
CGCCTGCTGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCTGATCGAGCTCTTCCTGCAGAGTT
CCTATCAGACTGAGATTGGGCAGACCCTGGACCTCCTCACAGCCCCCCAGGGCAATGTGGATCTTGTCAG
ATTCACTGAAAAGAGGTACAAATCTATTGTCAAGTACAAGACAGCTTTCTACTCCTTCTACCTTCCTATA
GCTGCAGCCATGTACATGGCAGGAATTGATGGCGAGAAGGAGCACGCCAATGCCAAGAAGATCCTGCTGG
AGATGGGGGAGTTCTTTCAGATTCAGGATGATTACCTTGACCTCTTTGGGGACCCCAGTGTGACCGGCAA
AATTGGCACTGACATCCAGGACAACAAATGCAGCTGGCTGGTGGTTCAGTGTCTGCAACGGGCCACTCCA
GAACAGTACCAGATCCTGAAGGAAAATTACGGGCAGAAGGAGGCTGAGAAAGTGGCCCGGGTGAAGGCGC
TATATGAGGAGCTGGATCTGCCAGCAGTGTTCTTGCAATATGAGGAAGACAGTTACAGCCACATTATGGC
TCTCATTGAACAGTACGCAGCACCCCTGCCCCCAGCCGTCTTTCTGGGGCTTGCGCGCAAAATCTACAAG
CGGAGAAAGTGA

Translation (353 aa):
MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRE
LVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIY
RLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPI
AAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATP
EQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYK
RRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH