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Report for CCDS800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
800.1 Public Homo sapiens 1 CYB561D1 24 110 108 CCDS HistoryNCBI Gene:284613Re-query CCDS DB by CCDS ID:800.1Re-query CCDS DB by GeneID:284613See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 800.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420578.7 ENSP00000413530.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000420578.7Link to Ensembl Protein Viewer:ENSP00000413530.2Re-query CCDS DB by Nucleotide ID:ENST00000420578Re-query CCDS DB by Protein ID:ENSP00000413530
Original member Current member NCBI NM_182580.3 NP_872386.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182580.3Link to Protein Sequence:NP_872386.1Re-query CCDS DB by Nucleotide ID:NM_182580Re-query CCDS DB by Protein ID:NP_872386Link to BLAST:NP_872386.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872386.1 229 Q8N8Q1-1 229 100% 0 0

Chromosomal Locations for CCDS 800.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109494140 109494287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109495143 109495180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109495756 109496259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGACTGACCCGCTGGCTGCGGA
GAGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAGCGCTGTCCCGGCC
AGGAACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCTGCCTCTGCATGGCTGAAGCC
ATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCACT
GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTCTGGGCCTGGGCTTCATCATCTCCAGCAGGACCCG
CAGTGAGCTGCCTCATCTGGTGTCCTGGCACAGCTGGGTGGGAGCCCTGACACTGCTGGCCACTGCTGTC
CAGGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTCAAGC
TCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTC
AGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCAGCC
CTGGTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGA

Translation (229 aa):
MQPLEVGLVPAPAGEPRLTRWLRRGSGILAHLVALGFTIFLTALSRPGTSLFSWHPVFMALAFCLCMAEA
ILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWHSWVGALTLLATAV
QALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGMYSVWFQAQIKGAAWYLCLALPVYPA
LVIMHQISRSYLPRKKMEM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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