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Report for CCDS129.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
129.1 Public Homo sapiens 1 UBIAD1 24 110 108 CCDS HistoryNCBI Gene:29914Re-query CCDS DB by CCDS ID:129.1Re-query CCDS DB by GeneID:29914See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 129.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376810.6 ENSP00000366006.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376810.6Link to Ensembl Protein Viewer:ENSP00000366006.5Re-query CCDS DB by Nucleotide ID:ENST00000376810Re-query CCDS DB by Protein ID:ENSP00000366006
Original member Current member NCBI NM_013319.3 NP_037451.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013319.3Link to Protein Sequence:NP_037451.1Re-query CCDS DB by Nucleotide ID:NM_013319Re-query CCDS DB by Protein ID:NP_037451Link to BLAST:NP_037451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037451.1 338 Q9Y5Z9-1 338 100% 0 0

Chromosomal Locations for CCDS 129.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 11273532 11274060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11285644 11286131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGCGGCCTCTCAGGTCCTGGGGGAGAAGATTAACATCCTGTCGGGAGAGACTGTCAAAGCTGGGGACA
GGGACCCGCTGGGGAACGACTGTCCCGAGCAAGATAGGCTCCCCCAGCGCTCCTGGAGGCAGAAGTGTGC
CTCCTACGTGTTGGCCCTGAGGCCCTGGAGCTTCAGTGCCTCACTCACACCGGTGGCCCTGGGCAGTGCC
CTTGCCTACAGATCCCACGGTGTCCTGGATCCCAGGCTCTTGGTGGGTTGTGCCGTGGCTGTCCTGGCTG
TGCACGGGGCCGGTAATTTGGTCAACACTTACTATGACTTTTCCAAGGGCATTGACCACAAAAAGAGTGA
TGACAGGACACTTGTGGACCGAATCTTGGAGCCGCAGGATGTCGTCCGGTTCGGAGTCTTCCTCTACACG
TTGGGCTGCGTCTGTGCCGCTTGCCTCTACTACCTGTCCCCTCTGAAACTGGAGCACTTGGCTCTTATCT
ACTTTGGAGGCCTGTCTGGCTCCTTTCTCTACACAGGAGGAATTGGATTCAAGTACGTGGCTCTGGGAGA
CCTCATCATCCTCATCACTTTTGGCCCGCTGGCTGTGATGTTCGCCTACGCCATCCAGGTGGGGTCCCTG
GCCATCTTCCCACTGGTCTATGCCATCCCCCTCGCCCTCAGCACCGAGGCCATTCTCCATTCCAACAACA
CCAGGGACATGGAGTCCGACCGGGAGGCTGGTATCGTCACGCTGGCCATCCTCATCGGCCCCACGTTCTC
CTACATTCTCTACAACACACTGCTCTTCCTGCCCTACCTGGTCTTCAGCATCCTGGCCACACACTGCACC
ATCAGCCTGGCACTCCCCCTGCTTACCATTCCCATGGCCTTCTCCCTTGAGAGACAGTTTCGAAGCCAGG
CCTTCAACAAACTGCCCCAGAGGACTGCCAAGCTCAACCTCCTGCTGGGACTTTTCTATGTCTTTGGCAT
CATTCTGGCACCAGCAGGCAGTCTGCCCAAAATTTAA

Translation (338 aa):
MAASQVLGEKINILSGETVKAGDRDPLGNDCPEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSA
LAYRSHGVLDPRLLVGCAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYT
LGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGSL
AIFPLVYAIPLALSTEAILHSNNTRDMESDREAGIVTLAILIGPTFSYILYNTLLFLPYLVFSILATHCT
ISLALPLLTIPMAFSLERQFRSQAFNKLPQRTAKLNLLLGLFYVFGIILAPAGSLPKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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