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Report for CCDS31432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31432.1 Public Homo sapiens 11 CALCA 24 110 108 CCDS HistoryNCBI Gene:796Re-query CCDS DB by CCDS ID:31432.1Re-query CCDS DB by GeneID:796See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31432.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000486207.6 ENSP00000417833.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000486207.6Link to Ensembl Protein Viewer:ENSP00000417833.1Re-query CCDS DB by Nucleotide ID:ENST00000486207Re-query CCDS DB by Protein ID:ENSP00000417833
Original member Current member EBI ENST00000706042.1 ENSP00000516203.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000706042.1Link to Ensembl Protein Viewer:ENSP00000516203.1Re-query CCDS DB by Nucleotide ID:ENST00000706042Re-query CCDS DB by Protein ID:ENSP00000516203
Original member Current member EBI ENST00000706043.1 ENSP00000516204.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000706043.1Link to Ensembl Protein Viewer:ENSP00000516204.1Re-query CCDS DB by Nucleotide ID:ENST00000706043Re-query CCDS DB by Protein ID:ENSP00000516204
Original member Current member NCBI NM_001033953.3 NP_001029125.1 Accepted alive Link to Nucleotide Sequence:NM_001033953.3Link to Protein Sequence:NP_001029125.1Re-query CCDS DB by Nucleotide ID:NM_001033953Re-query CCDS DB by Protein ID:NP_001029125Link to BLAST:NP_001029125.1
Original member Current member NCBI NM_001378950.1 NP_001365879.1 Accepted alive Link to Nucleotide Sequence:NM_001378950.1Link to Protein Sequence:NP_001365879.1Re-query CCDS DB by Nucleotide ID:NM_001378950Re-query CCDS DB by Protein ID:NP_001365879Link to BLAST:NP_001365879.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001029125.1 128 P06881-1 128 100% 0 0
NP_001365879.1 128 P06881-1 128 100% 0 0

Chromosomal Locations for CCDS 31432.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 14967695 14967854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 14969935 14970075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 14971107 14971192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGGGCTTCCAAAAGTTCTCCCCCTTCCTGGCTCTCAGCATCTTGGTCCTGTTGCAGGCAGGCAGCCTCC
ATGCAGCACCATTCAGGTCTGCCCTGGAGAGCAGCCCAGCAGACCCGGCCACGCTCAGTGAGGACGAAGC
GCGCCTCCTGCTGGCTGCACTGGTGCAGGACTATGTGCAGATGAAGGCCAGTGAGCTGGAGCAGGAGCAA
GAGAGAGAGGGCTCCAGAATCATTGCCCAGAAGAGAGCCTGTGACACTGCCACCTGTGTGACTCATCGGC
TGGCAGGCTTGCTGAGCAGATCAGGGGGTGTGGTGAAGAACAACTTTGTGCCCACCAATGTGGGTTCCAA
AGCCTTTGGCAGGCGCCGCAGGGACCTTCAAGCCTGA

Translation (128 aa):
MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQMKASELEQEQ
EREGSRIIAQKRACDTATCVTHRLAGLLSRSGGVVKNNFVPTNVGSKAFGRRRRDLQA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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