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Report for CCDS54219.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54219.1 Public Homo sapiens 19 KANK2 24 110 108 CCDS HistoryNCBI Gene:25959Re-query CCDS DB by CCDS ID:54219.1Re-query CCDS DB by GeneID:25959See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54219.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000589359.5 ENSP00000468002.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589359.5Link to Ensembl Protein Viewer:ENSP00000468002.1Re-query CCDS DB by Nucleotide ID:ENST00000589359Re-query CCDS DB by Protein ID:ENSP00000468002
Original member Current member NCBI NM_001379548.1 NP_001366477.1 Accepted alive Link to Nucleotide Sequence:NM_001379548.1Link to Protein Sequence:NP_001366477.1Re-query CCDS DB by Nucleotide ID:NM_001379548Re-query CCDS DB by Protein ID:NP_001366477Link to BLAST:NP_001366477.1
Original member Current member NCBI NM_001379549.1 NP_001366478.1 Accepted alive Link to Nucleotide Sequence:NM_001379549.1Link to Protein Sequence:NP_001366478.1Re-query CCDS DB by Nucleotide ID:NM_001379549Re-query CCDS DB by Protein ID:NP_001366478Link to BLAST:NP_001366478.1
Original member Current member NCBI NM_001379550.1 NP_001366479.1 Accepted alive Link to Nucleotide Sequence:NM_001379550.1Link to Protein Sequence:NP_001366479.1Re-query CCDS DB by Nucleotide ID:NM_001379550Re-query CCDS DB by Protein ID:NP_001366479Link to BLAST:NP_001366479.1
Original member Current member NCBI NM_001379551.1 NP_001366480.1 Accepted alive Link to Nucleotide Sequence:NM_001379551.1Link to Protein Sequence:NP_001366480.1Re-query CCDS DB by Nucleotide ID:NM_001379551Re-query CCDS DB by Protein ID:NP_001366480Link to BLAST:NP_001366480.1
Original member Current member NCBI NM_001379552.1 NP_001366481.1 Accepted alive Link to Nucleotide Sequence:NM_001379552.1Link to Protein Sequence:NP_001366481.1Re-query CCDS DB by Nucleotide ID:NM_001379552Re-query CCDS DB by Protein ID:NP_001366481Link to BLAST:NP_001366481.1
Original member Current member NCBI NM_001379553.1 NP_001366482.1 Accepted alive Link to Nucleotide Sequence:NM_001379553.1Link to Protein Sequence:NP_001366482.1Re-query CCDS DB by Nucleotide ID:NM_001379553Re-query CCDS DB by Protein ID:NP_001366482Link to BLAST:NP_001366482.1
Original member Current member NCBI NM_001379554.1 NP_001366483.1 Accepted alive Link to Nucleotide Sequence:NM_001379554.1Link to Protein Sequence:NP_001366483.1Re-query CCDS DB by Nucleotide ID:NM_001379554Re-query CCDS DB by Protein ID:NP_001366483Link to BLAST:NP_001366483.1
Original member Current member NCBI NM_015493.7 NP_056308.3 Accepted alive Link to Nucleotide Sequence:NM_015493.7Link to Protein Sequence:NP_056308.3Re-query CCDS DB by Nucleotide ID:NM_015493Re-query CCDS DB by Protein ID:NP_056308Link to BLAST:NP_056308.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001366477.1 859 Q63ZY3-2 859 100% 0 0
NP_001366478.1 859 Q63ZY3-2 859 100% 0 0
NP_001366479.1 859 Q63ZY3-2 859 100% 0 0
NP_001366480.1 859 Q63ZY3-2 859 100% 0 0
NP_001366481.1 859 Q63ZY3-2 859 100% 0 0
NP_001366482.1 859 Q63ZY3-2 859 100% 0 0
NP_001366483.1 859 Q63ZY3-2 859 100% 0 0
NP_056308.3 859 Q63ZY3-2 859 100% 0 0

Chromosomal Locations for CCDS 54219.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 11166558 11166611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11169877 11169966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11170048 11170248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11172981 11173123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11174473 11174692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11175902 11175989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11176578 11176817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11178345 11178471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11178553 11178720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11192831 11194042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11194475 11194511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2580 nt):
ATGGCCCAGGTCCTGCACGTGCCTGCTCCCTTCCCAGGGACCCCTGGCCCAGCCTCCCCACCTGCCTTCC
CTGCCAAGGACCCCGATCCACCCTACTCCGTGGAGACCCCCTATGGCTACCGCCTGGACCTGGACTTCCT
CAAGTACGTGGATGACATCGAGAAGGGCCACACGCTGCGACGCGTGGCAGTGCAGCGCCGCCCCCGCCTG
AGCTCGCTGCCCCGTGGCCCTGGCTCCTGGTGGACGTCCACTGAGTCGCTGTGCTCCAATGCCAGTGGGG
ACAGCCGCCACTCAGCCTATTCCTACTGCGGCCGTGGCTTCTACCCTCAGTATGGTGCTCTGGAGACCCG
CGGTGGCTTCAATCCGCGGGTGGAGCGCACGCTGCTGGATGCCCGTCGCCGTCTCGAGGACCAGGCGGCC
ACACCCACCGGCCTGGGCTCCCTGACCCCCAGTGCGGCCGGCTCGACAGCCTCCCTGGTGGGCGTGGGGT
TGCCACCCCCGACACCACGGAGTTCAGGACTGTCCACACCGGTGCCTCCCAGTGCCGGGCACCTGGCCCA
CGTGCGGGAGCAGATGGCGGGTGCCCTGCGGAAGCTGCGGCAGCTGGAGGAGCAGGTGAAGCTGATCCCT
GTGCTCCAGGTGAAGCTCTCGGTGCTCCAGGAGGAAAAGCGGCAGCTCACAGTACAACTTAAGAGCCAGA
AGTTCCTGGGCCACCCCACAGCGGGCCGGGGTCGCAGCGAGCTCTGCCTGGACCTCCCCGATCCCCCAGA
GGACCCAGTGGCACTGGAGACCCGGAGTGTGGGCACCTGGGTTCGAGAACGGGACTTGGGCATGCCTGAT
GGGGAGGCTGCCCTCGCCGCCAAGGTCGCTGTGCTGGAGACCCAGCTCAAGAAGGCGCTGCAGGAGCTGC
AGGCAGCTCAGGCCCGGCAGGCTGACCCCCAGCCCCAGGCCTGGCCACCGCCGGACAGCCCGGTCCGCGT
GGATACAGTCCGGGTGGTAGAAGGGCCACGGGAGGTGGAGGTGGTGGCCAGCACAGCCGCTGGCGCCCCC
GCACAGCGGGCCCAGAGCCTGGAGCCTTACGGCACAGGGCTGAGGGCCCTGGCAATGCCTGGTAGGCCTG
AGAGCCCACCTGTGTTCCGCAGCCAGGAGGTGGTGGAGACAATGTGCCCAGTGCCCGCTGCAGCTACCAG
CAACGTCCATATGGTGAAGAAGATTAGCATCACAGAGCGAAGCTGCGATGGAGCAGCAGGCCTCCCAGAA
GTTCCTGCCGAATCGTCTTCGTCACCCCCGGGGTCCGAGGTAGCCTCCCTTACACAGCCTGAGAAGAGCA
CAGGCCGAGTGCCCACCCAGGAGCCCACCCACAGGGAGCCCACCAGGCAAGCAGCCTCCCAAGAGTCCGA
GGAGGCCGGGGGCACCGCACCTCCGCTGTCCTCCCCTCCAGGCGGGCCCCCGGCAGGCGTGCGATCTATC
ATGAAACGGAAAGAGGAGGTTGCAGACCCCACGGCCCACCGGAGGAGCCTCCAGTTCGTGGGGGTCAACG
GCGGGTATGAGTCGTCATCCGAGGACTCCAGCACAGCAGAGAACATCTCAGACAACGACAGCACAGAGAA
CGAGGCCCCAGAGCCGAGGGAGAGGGTTCCGAGTGTGGCCGAAGCCCCCCAGCTCAGGCCTGCAGGGACG
GCAGCGGCCAAGACCAGCCGGCAGGAGTGTCAGCTGTCTCGAGAATCTCAGCACATACCCACTGCTGAGG
GGGCATCAGGATCAAACACGGAGGAGGAGATCAGGATGGAGCTAAGCCCTGACCTCATCTCAGCCTGCTT
GGCCCTGGAAAAGTACCTGGACAATCCCAACGCCCTCACAGAGCGGGAGCTGAAAGTGGCCTACACCACA
GTGCTGCAGGAGTGGCTGCGCCTGGCCTGCCGCAGCGACGCACACCCCGAGCTGGTGCGGCGGCACCTGG
TCACGTTCCGGGCCATGTCTGCGCGGCTGCTGGACTACGTGGTCAACATCGCCGACAGCAACGGCAACAC
AGCCCTGCACTACTCCGTGTCTCATGCCAACTTCCCCGTGGTGCAGCAGCTGCTCGACAGCGGTGTCTGC
AAGGTGGACAAACAGAACCGTGCTGGCTACAGCCCTATTATGCTCACCGCCCTGGCCACCCTGAAGACCC
AGGACGACATCGAGACTGTCCTTCAGCTCTTCCGGCTTGGCAACATCAATGCCAAAGCCAGCCAGGCAGG
ACAGACGGCCCTGATGCTGGCCGTCAGCCACGGGCGGGTGGACGTTGTCAAAGCCCTGCTGGCCTGTGAG
GCAGATGTCAACGTGCAAGATGATGACGGCTCCACGGCCCTCATGTGCGCCTGTGAGCACGGCCACAAGG
AGATCGCGGGGCTGCTGCTGGCCGTGCCCAGCTGTGACATCTCACTCACAGATCGCGATGGGAGCACAGC
TCTGATGGTGGCCTTGGACGCAGGGCAGAGTGAGATTGCGTCCATGCTGTATTCCCGCATGAACATCAAG
TGCTCGTTTGCCCCAATGTCAGATGACGAGAGCCCTACATCATCCTCGGCAGAAGAGTAG

Translation (859 aa):
MAQVLHVPAPFPGTPGPASPPAFPAKDPDPPYSVETPYGYRLDLDFLKYVDDIEKGHTLRRVAVQRRPRL
SSLPRGPGSWWTSTESLCSNASGDSRHSAYSYCGRGFYPQYGALETRGGFNPRVERTLLDARRRLEDQAA
TPTGLGSLTPSAAGSTASLVGVGLPPPTPRSSGLSTPVPPSAGHLAHVREQMAGALRKLRQLEEQVKLIP
VLQVKLSVLQEEKRQLTVQLKSQKFLGHPTAGRGRSELCLDLPDPPEDPVALETRSVGTWVRERDLGMPD
GEAALAAKVAVLETQLKKALQELQAAQARQADPQPQAWPPPDSPVRVDTVRVVEGPREVEVVASTAAGAP
AQRAQSLEPYGTGLRALAMPGRPESPPVFRSQEVVETMCPVPAAATSNVHMVKKISITERSCDGAAGLPE
VPAESSSSPPGSEVASLTQPEKSTGRVPTQEPTHREPTRQAASQESEEAGGTAPPLSSPPGGPPAGVRSI
MKRKEEVADPTAHRRSLQFVGVNGGYESSSEDSSTAENISDNDSTENEAPEPRERVPSVAEAPQLRPAGT
AAAKTSRQECQLSRESQHIPTAEGASGSNTEEEIRMELSPDLISACLALEKYLDNPNALTERELKVAYTT
VLQEWLRLACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVC
KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE
ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMNIK
CSFAPMSDDESPTSSSAEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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