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Report for CCDS34085.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34085.1 Public Homo sapiens 4 GUCY1A1 24 110 108 CCDS HistoryNCBI Gene:2982Re-query CCDS DB by CCDS ID:34085.1Re-query CCDS DB by GeneID:2982See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 34085.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296518.11 ENSP00000296518.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296518.11Link to Ensembl Protein Viewer:ENSP00000296518.7Re-query CCDS DB by Nucleotide ID:ENST00000296518Re-query CCDS DB by Protein ID:ENSP00000296518
Original member Current member EBI ENST00000455639.6 ENSP00000412201.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455639.6Link to Ensembl Protein Viewer:ENSP00000412201.2Re-query CCDS DB by Nucleotide ID:ENST00000455639Re-query CCDS DB by Protein ID:ENSP00000412201
Original member Current member EBI ENST00000511108.5 ENSP00000421493.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000511108.5Link to Ensembl Protein Viewer:ENSP00000421493.1Re-query CCDS DB by Nucleotide ID:ENST00000511108Re-query CCDS DB by Protein ID:ENSP00000421493
Original member Current member EBI ENST00000506455.6 ENSP00000424361.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000506455.6Link to Ensembl Protein Viewer:ENSP00000424361.1Re-query CCDS DB by Nucleotide ID:ENST00000506455Re-query CCDS DB by Protein ID:ENSP00000424361
Original member Current member EBI ENST00000513574.1 ENSP00000426040.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000513574.1Link to Ensembl Protein Viewer:ENSP00000426040.1Re-query CCDS DB by Nucleotide ID:ENST00000513574Re-query CCDS DB by Protein ID:ENSP00000426040
Original member Current member NCBI NM_000856.6 NP_000847.2 Accepted alive Link to Nucleotide Sequence:NM_000856.6Link to Protein Sequence:NP_000847.2Re-query CCDS DB by Nucleotide ID:NM_000856Re-query CCDS DB by Protein ID:NP_000847Link to BLAST:NP_000847.2
Original member Current member NCBI NM_001130682.3 NP_001124154.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130682.3Link to Protein Sequence:NP_001124154.1Re-query CCDS DB by Nucleotide ID:NM_001130682Re-query CCDS DB by Protein ID:NP_001124154Link to BLAST:NP_001124154.1
Original member Current member NCBI NM_001130683.4 NP_001124155.1 Accepted alive Link to Nucleotide Sequence:NM_001130683.4Link to Protein Sequence:NP_001124155.1Re-query CCDS DB by Nucleotide ID:NM_001130683Re-query CCDS DB by Protein ID:NP_001124155Link to BLAST:NP_001124155.1
Original member Current member NCBI NM_001130684.3 NP_001124156.1 Accepted alive Link to Nucleotide Sequence:NM_001130684.3Link to Protein Sequence:NP_001124156.1Re-query CCDS DB by Nucleotide ID:NM_001130684Re-query CCDS DB by Protein ID:NP_001124156Link to BLAST:NP_001124156.1
Original member Current member NCBI NM_001256449.2 NP_001243378.1 Accepted alive Link to Nucleotide Sequence:NM_001256449.2Link to Protein Sequence:NP_001243378.1Re-query CCDS DB by Nucleotide ID:NM_001256449Re-query CCDS DB by Protein ID:NP_001243378Link to BLAST:NP_001243378.1
Original member Current member NCBI NM_001379666.1 NP_001366595.1 Accepted alive Link to Nucleotide Sequence:NM_001379666.1Link to Protein Sequence:NP_001366595.1Re-query CCDS DB by Nucleotide ID:NM_001379666Re-query CCDS DB by Protein ID:NP_001366595Link to BLAST:NP_001366595.1
Original member Current member NCBI NM_001379667.1 NP_001366596.1 Accepted alive Link to Nucleotide Sequence:NM_001379667.1Link to Protein Sequence:NP_001366596.1Re-query CCDS DB by Nucleotide ID:NM_001379667Re-query CCDS DB by Protein ID:NP_001366596Link to BLAST:NP_001366596.1
Original member Current member NCBI NM_001379668.1 NP_001366597.1 Accepted alive Link to Nucleotide Sequence:NM_001379668.1Link to Protein Sequence:NP_001366597.1Re-query CCDS DB by Nucleotide ID:NM_001379668Re-query CCDS DB by Protein ID:NP_001366597Link to BLAST:NP_001366597.1
Original member Current member NCBI NM_001379669.1 NP_001366598.1 Accepted alive Link to Nucleotide Sequence:NM_001379669.1Link to Protein Sequence:NP_001366598.1Re-query CCDS DB by Nucleotide ID:NM_001379669Re-query CCDS DB by Protein ID:NP_001366598Link to BLAST:NP_001366598.1
Original member Current member NCBI NM_001379670.1 NP_001366599.1 Accepted alive Link to Nucleotide Sequence:NM_001379670.1Link to Protein Sequence:NP_001366599.1Re-query CCDS DB by Nucleotide ID:NM_001379670Re-query CCDS DB by Protein ID:NP_001366599Link to BLAST:NP_001366599.1
Original member Current member NCBI NM_001379671.1 NP_001366600.1 Accepted alive Link to Nucleotide Sequence:NM_001379671.1Link to Protein Sequence:NP_001366600.1Re-query CCDS DB by Nucleotide ID:NM_001379671Re-query CCDS DB by Protein ID:NP_001366600Link to BLAST:NP_001366600.1
Original member Current member NCBI NM_001379672.1 NP_001366601.1 Accepted alive Link to Nucleotide Sequence:NM_001379672.1Link to Protein Sequence:NP_001366601.1Re-query CCDS DB by Nucleotide ID:NM_001379672Re-query CCDS DB by Protein ID:NP_001366601Link to BLAST:NP_001366601.1
Original member Current member NCBI NM_001379673.1 NP_001366602.1 Accepted alive Link to Nucleotide Sequence:NM_001379673.1Link to Protein Sequence:NP_001366602.1Re-query CCDS DB by Nucleotide ID:NM_001379673Re-query CCDS DB by Protein ID:NP_001366602Link to BLAST:NP_001366602.1
Original member Current member NCBI NM_001379674.1 NP_001366603.1 Accepted alive Link to Nucleotide Sequence:NM_001379674.1Link to Protein Sequence:NP_001366603.1Re-query CCDS DB by Nucleotide ID:NM_001379674Re-query CCDS DB by Protein ID:NP_001366603Link to BLAST:NP_001366603.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000847.2 690 Q02108-1 690 100% 0 0
NP_001124154.1 690 Q02108-1 690 100% 0 0
NP_001124155.1 690 Q02108-1 690 100% 0 0
NP_001124156.1 690 Q02108-1 690 100% 0 0
NP_001243378.1 690 Q02108-1 690 100% 0 0
NP_001366595.1 690 Q02108-1 690 100% 0 0
NP_001366596.1 690 Q02108-1 690 100% 0 0
NP_001366597.1 690 Q02108-1 690 100% 0 0
NP_001366598.1 690 Q02108-1 690 100% 0 0
NP_001366599.1 690 Q02108-1 690 100% 0 0
NP_001366600.1 690 Q02108-1 690 100% 0 0
NP_001366601.1 690 Q02108-1 690 100% 0 0
NP_001366602.1 690 Q02108-1 690 100% 0 0
NP_001366603.1 690 Q02108-1 690 100% 0 0

Chromosomal Locations for CCDS 34085.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 155696868 155697122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155703932 155703993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155708236 155708294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155710542 155711251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155713098 155713583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155717159 155717302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155722038 155722192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155730030 155730231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2073 nt):
ATGTTCTGCACGAAGCTCAAGGATCTCAAGATCACAGGAGAGTGTCCTTTCTCCTTACTGGCACCAGGTC
AAGTTCCTAACGAGTCTTCAGAGGAGGCAGCAGGAAGCTCAGAGAGCTGCAAAGCAACCGTGCCCATCTG
TCAAGACATTCCTGAGAAGAACATACAAGAAAGTCTTCCTCAAAGAAAAACCAGTCGGAGCCGAGTCTAT
CTTCACACTTTGGCAGAGAGTATTTGCAAACTGATTTTCCCAGAGTTTGAACGGCTGAATGTTGCACTTC
AGAGAACATTGGCAAAGCACAAAATAAAAGAAAGCAGGAAATCTTTGGAAAGAGAAGACTTTGAAAAAAC
AATTGCAGAGCAAGCAGTTGCAGCAGGAGTTCCAGTGGAGGTTATCAAAGAATCTCTTGGTGAAGAGGTT
TTTAAAATATGTTACGAGGAAGATGAAAACATCCTTGGGGTGGTTGGAGGCACCCTTAAAGATTTTTTAA
ACAGCTTCAGTACCCTTCTGAAACAGAGCAGCCATTGCCAAGAAGCAGGAAAAAGGGGCAGGCTTGAGGA
CGCCTCCATTCTATGCCTGGATAAGGAGGATGATTTTCTACATGTTTACTACTTCTTCCCTAAGAGAACC
ACCTCCCTGATTCTTCCCGGCATCATAAAGGCAGCTGCTCACGTATTATATGAAACGGAAGTGGAAGTGT
CGTTAATGCCTCCCTGCTTCCATAATGATTGCAGCGAGTTTGTGAATCAGCCCTACTTGTTGTACTCCGT
TCACATGAAAAGCACCAAGCCATCCCTGTCCCCCAGCAAACCCCAGTCCTCGCTGGTGATTCCCACATCG
CTATTCTGCAAGACATTTCCATTCCATTTCATGTTTGACAAAGATATGACAATTCTGCAATTTGGCAATG
GCATCAGAAGGCTGATGAACAGGAGAGACTTTCAAGGAAAGCCTAATTTTGAAGAATACTTTGAAATTCT
GACTCCAAAAATCAACCAGACGTTTAGCGGGATCATGACTATGTTGAATATGCAGTTTGTTGTACGAGTG
AGGAGATGGGACAACTCTGTGAAAAAATCTTCAAGGGTTATGGACCTCAAAGGCCAAATGATCTACATTG
TTGAATCCAGTGCAATCTTGTTTTTGGGGTCACCCTGTGTGGACAGATTAGAAGATTTTACAGGACGAGG
GCTCTACCTCTCAGACATCCCAATTCACAATGCACTGAGGGATGTGGTCTTAATAGGGGAACAAGCCCGA
GCTCAAGATGGCCTGAAGAAGAGGCTGGGGAAGCTGAAGGCTACCCTTGAGCAAGCCCACCAAGCCCTGG
AGGAGGAGAAGAAAAAGACAGTAGACCTTCTGTGCTCCATATTTCCCTGTGAGGTTGCTCAGCAGCTGTG
GCAAGGGCAAGTTGTGCAAGCCAAGAAGTTCAGTAATGTCACCATGCTCTTCTCAGACATCGTTGGGTTC
ACTGCCATCTGCTCCCAGTGCTCACCGCTGCAGGTCATCACCATGCTCAATGCACTGTACACTCGCTTCG
ACCAGCAGTGTGGAGAGCTGGATGTCTACAAGGTGGAGACCATTGGCGATGCCTATTGTGTAGCTGGGGG
ATTACACAAAGAGAGTGATACTCATGCTGTTCAGATAGCGCTGATGGCCCTGAAGATGATGGAGCTCTCT
GATGAAGTTATGTCTCCCCATGGAGAACCTATCAAGATGCGAATTGGACTGCACTCTGGATCAGTTTTTG
CTGGCGTCGTTGGAGTTAAAATGCCCCGTTACTGTCTTTTTGGAAACAATGTCACTCTGGCTAACAAATT
TGAGTCCTGCAGTGTACCACGAAAAATCAATGTCAGCCCAACAACTTACAGATTACTCAAAGACTGTCCT
GGTTTCGTGTTTACCCCTCGATCAAGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCT
GCCATTTTCTGGATGCTTACCAACAAGGAACAAACTCAAAACCATGCTTCCAAAAGAAAGATGTGGAAGA
TGGCAATGCCAATTTTTTAGGCAAAGCATCAGGAATAGATTAG

Translation (690 aa):
MFCTKLKDLKITGECPFSLLAPGQVPNESSEEAAGSSESCKATVPICQDIPEKNIQESLPQRKTSRSRVY
LHTLAESICKLIFPEFERLNVALQRTLAKHKIKESRKSLEREDFEKTIAEQAVAAGVPVEVIKESLGEEV
FKICYEEDENILGVVGGTLKDFLNSFSTLLKQSSHCQEAGKRGRLEDASILCLDKEDDFLHVYYFFPKRT
TSLILPGIIKAAAHVLYETEVEVSLMPPCFHNDCSEFVNQPYLLYSVHMKSTKPSLSPSKPQSSLVIPTS
LFCKTFPFHFMFDKDMTILQFGNGIRRLMNRRDFQGKPNFEEYFEILTPKINQTFSGIMTMLNMQFVVRV
RRWDNSVKKSSRVMDLKGQMIYIVESSAILFLGSPCVDRLEDFTGRGLYLSDIPIHNALRDVVLIGEQAR
AQDGLKKRLGKLKATLEQAHQALEEEKKKTVDLLCSIFPCEVAQQLWQGQVVQAKKFSNVTMLFSDIVGF
TAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKESDTHAVQIALMALKMMELS
DEVMSPHGEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCP
GFVFTPRSREELPPNFPSEIPGICHFLDAYQQGTNSKPCFQKKDVEDGNANFLGKASGID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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