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Report for CCDS10946.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10946.1 Public Homo sapiens 16 WFDC1 24 110 108 CCDS HistoryNCBI Gene:58189Re-query CCDS DB by CCDS ID:10946.1Re-query CCDS DB by GeneID:58189See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10946.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219454.10 ENSP00000219454.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000219454.10Link to Ensembl Protein Viewer:ENSP00000219454.5Re-query CCDS DB by Nucleotide ID:ENST00000219454Re-query CCDS DB by Protein ID:ENSP00000219454
Original member Current member EBI ENST00000568638.1 ENSP00000456920.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000568638.1Link to Ensembl Protein Viewer:ENSP00000456920.1Re-query CCDS DB by Nucleotide ID:ENST00000568638Re-query CCDS DB by Protein ID:ENSP00000456920
Original member Current member NCBI NM_001282466.2 NP_001269395.1 Accepted alive Link to Nucleotide Sequence:NM_001282466.2Link to Protein Sequence:NP_001269395.1Re-query CCDS DB by Nucleotide ID:NM_001282466Re-query CCDS DB by Protein ID:NP_001269395Link to BLAST:NP_001269395.1
Original member Current member NCBI NM_021197.4 NP_067020.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021197.4Link to Protein Sequence:NP_067020.2Re-query CCDS DB by Nucleotide ID:NM_021197Re-query CCDS DB by Protein ID:NP_067020Link to BLAST:NP_067020.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269395.1 220 Q9HC57 220 100% 0 0
NP_067020.2 220 Q9HC57 220 100% 0 0

Chromosomal Locations for CCDS 10946.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 84294972 84295115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84312961 84313153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84318272 84318355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84319431 84319571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84324419 84324460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 84326882 84326940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGCCTTTAACCGGCGTGGGGCCGGGCAGCTGCAGGAGGCAGATCATCCGGGCTCTGTGCCTCTTGCTAC
TTCTCCTCCACGCCGGCTCTGCCAAGAATATCTGGAAACGGGCATTGCCTGCGAGGCTGGCCGAGAAATC
CCGTGCCGAGGAGGCGGGCGCGCCCGGCGGCCCCCGGCAGCCCCGAGCAGACCGCTGCCCGCCGCCTCCG
CGGACGCTGCCCCCCGGCGCCTGCCAGGCCGCGCGCTGTCAGGCGGACTCCGAGTGCCCGCGGCACCGGC
GCTGCTGCTACAACGGATGCGCCTACGCCTGCCTAGAAGCTGTGCCGCCCCCGCCAGTCTTAGACTGGCT
GGTGCAGCCGAAACCTCGATGGCTTGGTGGCAATGGCTGGCTCCTGGATGGCCCTGAGGAGGTGTTACAA
GCAGAGGCGTGCAGCACCACGGAGGATGGGGCCGAACCCCTGCTCTGTCCCTCGGGCTATGAGTGCCACA
TCCTGAGCCCAGGTGACGTGGCCGAAGGTATCCCCAACCGTGGGCAGTGCGTCAAGCAGCGCCGGCAAGC
AGATGGGCGAATCCTACGACACAAACTTTACAAAGAATATCCAGAAGGTGACTCAAAGAATGTGGCAGAA
CCTGGAAGGGGACAACAGAAGCACTTTCAGTAA

Translation (220 aa):
MPLTGVGPGSCRRQIIRALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQPRADRCPPPP
RTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKPRWLGGNGWLLDGPEEVLQ
AEACSTTEDGAEPLLCPSGYECHILSPGDVAEGIPNRGQCVKQRRQADGRILRHKLYKEYPEGDSKNVAE
PGRGQQKHFQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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