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Report for CCDS44748.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44748.1 Public Homo sapiens 11 TMEM25 24 110 108 CCDS HistoryNCBI Gene:84866Re-query CCDS DB by CCDS ID:44748.1Re-query CCDS DB by GeneID:84866See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44748.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354064.11 ENSP00000278959.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354064.11Link to Ensembl Protein Viewer:ENSP00000278959.8Re-query CCDS DB by Nucleotide ID:ENST00000354064Re-query CCDS DB by Protein ID:ENSP00000278959
Original member Current member NCBI NM_001144036.2 NP_001137508.1 Accepted alive Link to Nucleotide Sequence:NM_001144036.2Link to Protein Sequence:NP_001137508.1Re-query CCDS DB by Nucleotide ID:NM_001144036Re-query CCDS DB by Protein ID:NP_001137508Link to BLAST:NP_001137508.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137508.1 218 Q86YD3-3 218 100% 0 0

Chromosomal Locations for CCDS 44748.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 118531802 118531871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118532917 118533207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118533857 118533887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118534029 118534129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118534266 118534355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118534507 118534580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGGCGCTGCCTCCAGGCCCAGCCGCCCTCCGGCACACACTGCTGCTCCTGCCAGCCCTTCTGAGCTCAG
TCAAGCCAGAGATTGCCCAAGTCGGCGCCAAGTACCAGGAAGCTCAGGGCCCAGGCCTCCTGGTTGTCCT
GTTTGCCCTGGTGCGTGCCAACCCGCCGGCCAATGTCACCTGGATCGACCAGGATGGGCCAGTGACTGTC
AACACCTCTGACTTCCTGGTGCTGGATGCGCAGAACTACCCCTGGCTCACCAACCACACGGTGCAGCTGC
AGCTCCGCAGCCTGGCACACAACCTCTCGGTGGTGGCCACCAATGACGTGGGTGTCACCAGTGCGTCGCT
TCCAGCCCCAGGCCCCTCCCGGCACCCATCTCTGATATCAAGTGACTCCAACAACCTAAAACTCAACAAC
GTGCGCCTGCCACGGGAGAACATGTCCCTCCCGTCCAACCTTCAGCTCAATGACCTCACTCCAGATTCCA
GAGCAGTGAAACCAGCAGACCGGCAGATGGCTCAGAACAACAGCCGGCCAGAGCTTCTGGACCCGGAGCC
CGGCGGCCTCCTCACCAGCCAAGGTTTCATCCGCCTCCCAGTGCTGGGCTATATCTATCGAGTGTCCAGC
GTGAGCAGTGATGAGATCTGGCTCTGA

Translation (218 aa):
MALPPGPAALRHTLLLLPALLSSVKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTV
NTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNLKLNN
VRLPRENMSLPSNLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSS
VSSDEIWL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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