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Report for CCDS7414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7414.1 Public Homo sapiens 10 HECTD2 24 110 108 CCDS HistoryNCBI Gene:143279Re-query CCDS DB by CCDS ID:7414.1Re-query CCDS DB by GeneID:143279See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7414.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298068.10 ENSP00000298068.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298068.10Link to Ensembl Protein Viewer:ENSP00000298068.5Re-query CCDS DB by Nucleotide ID:ENST00000298068Re-query CCDS DB by Protein ID:ENSP00000298068
Original member Current member NCBI NM_182765.6 NP_877497.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182765.6Link to Protein Sequence:NP_877497.4Re-query CCDS DB by Nucleotide ID:NM_182765Re-query CCDS DB by Protein ID:NP_877497Link to BLAST:NP_877497.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_877497.4 776 Q5U5R9-1 776 100% 0 0

Chromosomal Locations for CCDS 7414.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 91410439 91410576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91425281 91425410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91460427 91460565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91461254 91461356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91462095 91462184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91478201 91478265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91481094 91481139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91482967 91483076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91484507 91484655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91485180 91485303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91487682 91487778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91491200 91491307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91492352 91492484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91493420 91493508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91496214 91496372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91498108 91498182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91498872 91498959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91499044 91499150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91500502 91500617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91501191 91501334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 91512264 91512384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2331 nt):
ATGAGTGAGGCGGTTCGGGTACCCTCGCCCGCCACTCCGCTGGTGGTGGCGGCGCCCGCGCCTGAGGAGA
GGAAAGGGAAGGAGTCAGAGCGCGAGAAGCTGCCGCCCATCGTATCGGCGGGCGCCGGCGCGACCGCGGG
TTTGGACAGAGGAGCCAAAGGCCAAATTTCCACTTTCAGCAGTTTTATTTCAGCTGTTAGCCCGAAGAAA
GAAGCTGCTGAAAACAGAAGTTCACCTGCACATCTTGTTTTCCCTAACATCAAGAATGTGAGAGAACCAC
CACCAATTTGCCTTGATGTTAGACAAAAACAGCGTACATCTATGGATGCATCATCATCCGAAATGAAGGC
CCCAGTCCTTCCAGAACCTATTCTTCCTATCCAGCCCAAAACTGTGAAAGACTTTCAGGAAGATGTAGAA
AAAGTTAAGTCATCAGGAGATTGGAAAGCAGTACATGATTTTTATCTAACAACGTTTGATTCTTTCCCAG
AATTAAATGCTGCATTTAAGAAAGATGCCACTGCCTCATTTAACACCATTGAAGACTCTGGGATTAATGC
TAAATTTGTGAATGCTGTGTATGATACCTTACTTAATACTCCTCAAGACGTTCAGAAGACAGTATTAAAG
GGAATCATTAACAGCCTGTTACGAGAATGGAAAGGTCCACGAACAAAAGATGATCTTAGAGCATATTTTA
TACTTTTACAGAATCCTCAGTTTAATAACACATCTACGTATGTCATCTATGCTCACTTGCTACGACAGAT
AGCTACCTTAGTGGAAGCTGACCATCATTTCCTAGTTCACTGGTTTAAAAAATTGTCCCAGAAGAGGTTC
AAACAATTGGTAGAGAGATTGCTGCAATTTATTTCTTTACGCCTGTTTCCTGCAAAGCCTGAAGAATTTC
CACCTATAACAAAGTGTTCCTGGTGGATTCCATCAGCCGCTAAAGTGTTGGCTTTACTTAATACTGCAAA
CAATTTAGTTCACCCTCCCCTTATTCCTTATACTGATTTCTATAATTCTACATTGGATCACATTGATCTC
ATGGAAGAATATCATACTTGGCAAAACTTTGGAAACTCTCACAGGTTTTCCTTCTGTCAGTACCCATTCG
TTATTTCTGTAGCTGCAAAAAAAATCATTATTCAGAGAGACTCAGAGCAACAGATGATAAACATCGCAAG
GCAAAGTCTGGTGGATAAAGTATCTCGAAGACAGAGACCTGATATGAATATATTATTTCTAAATATGAAA
GTAAGACGGACACATCTGGTTAGCGATTCACTTGATGAGCTAACCCGGAAAAGAGCCGATTTGAAAAAGA
AGTTAAAAGTTACATTTGTAGGGGAAGCTGGTTTGGATATGGGTGGTTTGACTAAAGAATGGTTCCTTCT
TCTAATTCGCCAAATTTTTCATCCAGATTATGGCATGTTTACATATCACAAGGATTCACACTGCCATTGG
TTTAGCAGCTTTAAATGTGATAACTATTCTGAATTCCGATTGGTTGGAATTCTTATGGGACTAGCTGTTT
ATAACAGCATCACCTTGGATATTCGTTTCCCTCCCTGCTGTTACAAGAAATTATTGAGCCCTCCCATCAT
TCCTAGTGATCAAAATATACCAGTAGGCATCTGCAATGTTACCGTGGACGACTTATGTCAAATTATGCCT
GAGTTGGCCCATGGATTAAGTGAACTCTTATCACATGAAGGCAATGTTGAAGAAGATTTCTATTCAACAT
TTCAGGTTTTTCAAGAAGAATTTGGAATAATCAAGTCCTATAATTTAAAGCCCGGTGGTGATAAAATTTC
AGTTACCAATCAAAATAGAAAAGAATATGTACAGCTTTATACTGACTTCCTTCTGAACAAATCCATCTAT
AAGCAGTTTGCTGCATTTTATTATGGATTTCATAGTGTGTGTGCTTCAAATGCCCTAATGCTGCTTCGTC
CAGAAGAGGTTGAAATTTTGGTCTGTGGAAGTCCTGACCTGGATATGCATGCTCTGCAGAGAAGTACTCA
GTATGATGGCTATGCAAAAACGGACTTAACTATAAAATACTTTTGGGATGTTGTGCTTGGATTTCCTCTT
GATCTTCAAAAGAAGTTGCTACATTTTACTACAGGGAGTGACAGAGTACCTGTAGGAGGGATGGCTGATT
TGAACTTTAAAATCTCAAAGAATGAAACTTCTACTAACTGCTTACCTGTGGCCCATACCTGCTTCAATCA
ACTTTGCCTTCCCCCCTACAAGAGCAAAAAGGATCTGAAACAGAAATTGATCATTGGAATTTCAAATTCA
GAAGGTTTTGGACTTGAGTAA

Translation (776 aa):
MSEAVRVPSPATPLVVAAPAPEERKGKESEREKLPPIVSAGAGATAGLDRGAKGQISTFSSFISAVSPKK
EAAENRSSPAHLVFPNIKNVREPPPICLDVRQKQRTSMDASSSEMKAPVLPEPILPIQPKTVKDFQEDVE
KVKSSGDWKAVHDFYLTTFDSFPELNAAFKKDATASFNTIEDSGINAKFVNAVYDTLLNTPQDVQKTVLK
GIINSLLREWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQIATLVEADHHFLVHWFKKLSQKRF
KQLVERLLQFISLRLFPAKPEEFPPITKCSWWIPSAAKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDL
MEEYHTWQNFGNSHRFSFCQYPFVISVAAKKIIIQRDSEQQMINIARQSLVDKVSRRQRPDMNILFLNMK
VRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHW
FSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMP
ELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIY
KQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPL
DLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNS
EGFGLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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