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Report for CCDS45885.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45885.1 Public Homo sapiens 18 ZNF407 24 110 108 CCDS HistoryNCBI Gene:55628Re-query CCDS DB by CCDS ID:45885.1Re-query CCDS DB by GeneID:55628See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45885.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299687.10 ENSP00000299687.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299687.10Link to Ensembl Protein Viewer:ENSP00000299687.4Re-query CCDS DB by Nucleotide ID:ENST00000299687Re-query CCDS DB by Protein ID:ENSP00000299687
Original member Current member NCBI NM_001384475.1 NP_001371404.1 Accepted alive Link to Nucleotide Sequence:NM_001384475.1Link to Protein Sequence:NP_001371404.1Re-query CCDS DB by Nucleotide ID:NM_001384475Re-query CCDS DB by Protein ID:NP_001371404Link to BLAST:NP_001371404.1
Original member Current member NCBI NM_017757.3 NP_060227.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017757.3Link to Protein Sequence:NP_060227.2Re-query CCDS DB by Nucleotide ID:NM_017757Re-query CCDS DB by Protein ID:NP_060227Link to BLAST:NP_060227.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371404.1 2248 Q9C0G0-1 2248 100% 0 0
NP_060227.2 2248 Q9C0G0-1 2248 100% 0 0

Chromosomal Locations for CCDS 45885.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 74631020 74635706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74641008 74641122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74781428 74781502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74877197 74877363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74881036 74881119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74889918 74890038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74920514 74920692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 75063150 75064468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6747 nt):
ATGATGGATAGTGAGAATAAACCCGAAAATGATGAGGATGAAAAGATAAACAAAGAAGCACAAGACTTGA
CAAAGCTTTCATCCCATAATGAAGACGGTGGGCCTGTATCTGATGTGATAGCAAGTTTCCCTGAGAATTC
TATGGGCAAAAGAGGTTTTTCAGAATCATCGAACTCTGATAGTGTTGTTATAGGAGAAGACAGAAATAAA
CATGCTTCCAAACGCAGGAAATTAGATGAGGCAGAGCCCCTTAAATCTGGAAAGCAAGGTATTTGTAGAT
TAGAAACTTCTGAGAGCTCAGTCACAGAAGGGGGTATTGCATTAGATGAAACAGGGAAGGAGACCTTTCT
GAGTGACTGCACAGTTGGAGGCACATGTCTCCCAAATGCCCTCTCCCCTTCTTGCAATTTTAGCACTATT
GATGTTGTTTCTCTGAAAACAGACACTGAAAAAACATCTGCTCAGGAAATGGTTTCCCTTGATCTGGAAA
GAGAATCTCCTTTCCCCCCGAAAGAAATTAGTGTTAGTTGTACCATTGGGAATGTAGATACAGTTCTCAA
ATGCAGCATCTGTGGGCATTTGTTTTCTTCTTGCTCTGACTTGGAAAAACATGCTGAGTCTCACATGCAG
CAGCCTAAGGAACATACCTGTTGTCACTGCAGCCACAAAGCAGAGAGCAGCTCAGCACTACATATGCATA
TCAAACAAGCACATGGGCCACAGAAGGTCTTTTCCTGTGATCTTTGTGGTTTTCAGTGTTCAGAAGAAAA
CTTGTTGAATGCACATTATCTTGGCAAAACACATCTCCGTCGTCAGAATCTGGCTGCTCGTGGAGGATTT
GTACAGATCTTAACAAAACAACCTTTTCCTAAAAAATCACGTACAATGGCAACAAAAAATGTTCACTCAA
AACCAAGAACTTCTAAATCAATAGCAAAGAATAGTGATTCAAAAGGATTACGAAATGTGGGAAGCACGTT
TAAAGATTTCAGAGGAAGTATTTCTAAACAAAGTGGTAGTAGCAGTGAGCTTCTTGTTGAAATGATGCCT
TCCAGAAATACTTTGTCACAGGAAGTAGAGATTGTTGAAGAACATGTTACTTCCCTTGGTCTAGCTCAGA
ATCCTGAAAACCAGAGTAGAAAGCTAGACACCTTAGTAACCTCAGAGGGTCTCTTAGAGAAATTGGAATC
TACAAAAAATACCCTTCAGGCAGCACACGGTAACAGTGTAACCTCGAGGCCAAGACCTGAGCGAAATATT
CTCGTGTTGGGTAATAGCTTTCGTCGACGAAGCAGCACTTTCACCTTGAAGGGCCAGGCAAAGAAAAGGT
TTAATCTTTTAGGAATTAAAAGAGGTACAAGTGAAACTCAGAGGATGTATATGAAACACTTGAGAACACA
GATGAAAACACACGATGCAGAATCAGTGCTGAAACACCTGGAAGCGTGCAGCAGTGTGCAGAGAGTGTGT
GTGACTACCTCAGAAACCCAGGAGGCAGAGCAGGGCCAGGGGAGTGCCCGTCCTCCGGACTCCGGGCTGC
ATTCCCTGACAGTGAAGCCAGCTTCTGGCTCTCAGACGTTGTGTGCTTGTACAGACTGTGGGCAAGTAGC
TACAAATAGGACAGATTTGGAAATCCATGTGAAAAGGTGCCATGCCAGAGAGATGAAATTTTACTGCCGT
ACTTGTGACTTCTCTAGTATGTCAAGAAGGGACTTAGATGAACATTTGCACAGTAACCAGCATCAGCAAA
CTGCTTCTGTCCTGAGTTGTCAGTGTTGTTCATTTATATCCTTGGATGAAATAAATCTTAGAGACCACAT
GAAGGAAAAGCACAATATGCATTTTCTTTGCACCCCTTGTAATCTGTTCTTTTTGTCTGAAAAAGATGTG
GAAGAACACAAAGCCACCGAGAAGCATATTAATTCATTGGTTCAACCAAAGACTTTGCAATCATCTAACA
GTGATTTGGTTTTACAGACTTTACCTTTGAGTACTTTAGAATCAGAAAACGCAAAAGAGTCTATGGATGA
CTCAGGAAAAGCATCTCAGGAAGAACCTCTGAAGTCCAGGGTAAGCCATGGTAATGAAGTGAGGCATTCC
AGTAAGCCTCAGTTTCAGTGTAAGAAGTGTTTTTATAAAACAAGATCTTCTACTGTTCTCACGAGACATA
TAAAGCTTCGGCATGGTCAAGACTATCATTTTCTTTGTAAAGCTTGTAATCTTTATTCATTGAGCAAAGA
AGGAATGGAGAAACACATTAAAAGAAGCAAGCATCTTGAAAATGCTAAGAAAAATAATATTGGCTTAAGC
TTTGAAGAATGTATTGAAAGGGTATGTATAGGTGCAAATGATAAAAAAGAAGAGTTTGATGTTTCCGGAA
ATGGAAGGATTGAAGGCCATATAGGTGTGCAATTACAAGAGCATTCCTATCTTGAGAAGGGCATGCTGGC
GTCTGAGGAACTGTCACAGTCTGGTGGTAGCACCAAAGATGATGAATTAGCTTCAACCACTACTCCAAAG
AGAGGGAGACCTAAAGGTAACATCTCACGGACGTGTTCACACTGTGGCCTTTTGGCCTCTAGTATTACAA
ACTTGACTGTTCACATTAGACGAAAACACAGTCACCAGTATAGTTATTTATGCAAAGTGTGTAAGTATTA
CACTGTAACTAAGGGAGATATGGAACGTCATTGTGCCACCAAGAAACATAAAGGACGGGTAGAAATAGAA
GCAAGTGGAAAACACAGTTCAGATATCATTGTTGGCCCTGAAGGGGGTAGCCTTGAAGCTGGTAAAAAGA
ATGCTGGCTCAGCAGTGACCATGTCAGATGAACATGCTAACAAACCAGCTGAGTCACCCACCTCCGTTTT
AGAGAAGCCAGATCGTGGAAACTCAATTGAAGCTGAAGTTGAAAATGTATTTCATTCTCTAGATGGAGAA
GTTAACAGCCATCTTCTTGATAAAAAGGAGCAAATATCTTCAGAGCCAGAGGACTTCGCCCAGCCGGGGG
ATGTGTACTCCCAGAGAGATGTTACAGGCACAGGTGAGAATAAGTGTTTGCACTGTGAGTTTAGTGCTCA
CTCCTCTGCTTCTCTAGAGCTGCATGTAAAACGGAAACATACAAAAGAGTTTGAGTTTTATTGCATGGCA
TGCGATTACTACGCGGTGACTCGTCGCGAGATGACCAGGCATGCAGCAACAGAGAAGCACAAAATGAAAA
GGCAGTCTTATCTCAACTCTGCTAATGTAGAAGCTGGTTCTGCAGACATGTCCAAAAACATCATTATGCC
TGAAGAAGAGCATCAACAAAATTCTGAGGAATTTCAAATAATTTCAGGTCAACCATCTGATACTCTTAAA
TCTAGAAATGCTGCAGATTGCTCTATTTTAAATGAGAATACTAATTTAGATATGTCTAAAGTGCTCTGCG
CTGCTGACTCTGTAGAAGTTGAGACTGAAGAAGAATCTAATTTCAATGAAGACCATTCCTTTTGTGAGAC
TTTCCAACAGGCTCCTGTCAAGGATAAAGTTAGGAAACCTGAGGAGATGATGTCACTTACTATGTCCTCA
AACTATGGCTCCCCAAGCAGATTTCAAAATGAAAATTCAGGAAGCTCTGCCTTAAATTGTGAGACAGCAA
AGAAAAACCATGAGATATCGAATGATGCAGGTGAGCTGCGTGTCCATTGTGAGGGTGAAGGAGGAAACGC
AGGAGACGGTGGAGGTGTTGTCCCCCACAGACACCTGTGCCCTGTGACGCTCGATGGGGAGCGCTCGGCT
GAAAGCCCTGTGCTCGTTGTGACAAGAATAACCAGAGAACAGGGAAATCTGGAGAGCGGGGGTCAGAACA
GAGTTGCACGTGGGCATGGTTTGGAAGACTTGAAAGGTGTCCAAGAAGATCCCGTTCTGGGGAATAAGGA
AATTCTGATGAATTCACAACATGAAACAGAATTTATTTTGGAGGAGGATGGCCCAGCTTCTGATAGCACA
GTTGAAAGTAGTGATGTCTATGAAACTATAATTAGTATTGATGATAAAGGGCAGGCCATGTACAGTTTTG
GTCGATTTGACTCCTCCATAATAAGAATAAAGAACCCTGAAGATGGTGAGTTGATAGACCAGTCTGAAGA
GGGCTTGATAGCAACGGGAGTGAGAATTAGTGAGCTGCCCTTGAAAGACTGTGCTCAAGGTGTGAAAAAG
AAGAAATCTGAGGGCAGTTCCATTGGTGAGTCTACACGAATTCGCTGTGATGATTGTGGCTTCTTAGCAG
ATGGACTGAGTGGACTGAATGTTCACATAGCCATGAAGCATCCTACAAAAGAGAAGCACTTCCATTGTTT
ACTCTGTGGAAAGTCGTTCTATACCGAAAGCAACCTTCACCAGCATCTGGCTAGTGCCGGCCACATGAGA
AATGAGCAGGCCAGTGTGGAGGAGCTTCCGGAGGGAGGGGCCACCTTTAAATGTGTCAAGTGCACAGAGC
CCTTTGATTCTGAACAGAATTTATTTTTACATATTAAAGGACAGCATGAGGAATTGCTGCGGGAGGTGAA
TAAGTATATAGTGGAAGACACTGAGCAAATCAACCGCGAGAGGGAGGAAAACCAGGGAAACGTCTGCAAG
TATTGTGGGAAGATGTGTCGAAGCAGCAACTCGATGGCCTTCCTGGCACACATTCGCACTCACACAGGAT
CAAAACCATTCAAGTGCAAGATATGCCATTTTGCAACAGCTCAGCTTGGAGATGCCAGAAACCATGTGAA
AAGGCACCTTGGGATGAGGGAATACAAGTGTCATGTCTGTGGGGTTGCTTTTGTAATGAAGAAGCACTTA
AATACTCATCTACTAGGCAAGCATGGAGTTGGCACCCCAAAAGAAAGGAAATTTACATGCCACTTATGTG
ATAGAAGTTTCACAGAGAAGTGGGCCCTGAACAACCACATGAAACTCCACACGGGAGAAAAGCCGTTTAA
ATGTACCTGGCCCACGTGCCATTACTCATTCCTCACAGCCTCCGCAATGAAAGACCACTACAGGACGCAC
ACAGGCGAGAAGTCGTTTCTGTGTGACCTCTGCGGCTTTGCCGGCGGGACCCGCCACGCCCTCACCAAGC
ATCGCAGACAGCACACAGGAGAAAAACCTTTCAAGTGCGATGAGTGTAACTTTGCCTCCACAACTCAGTC
CCATTTGACTCGGCATAAACGTGTCCACACTGGAGAAAAGCCCTACAGATGCCCCTGGTGTGACTACAGG
TCAAACTGTGCTGAAAATATCCGCAAACACATTCTGCATACTGGCAAACATGAAGGAGTCAAGATGTACA
ACTGTCCCAAGTGTGACTACGGGACCAACGTCCCGGTGGAGTTCCGGAACCATTTGAAGGAACAGCATCC
TGACATCGAAAACCCGGACCTCGCTTACCTGCATGCTGGCATTGTTTCCAAGTCGTACGAGTGCCGTCTA
AAGGGACAAGGAGCCACCTTCGTGGAGACAGACAGCCCCTTCACCGCGGCGGCCTTGGCAGAAGAGCCCC
TCGTCAAGGAGAAGCCCCTCAGAAGCAGCAGGAGGCCAGCGCCGCCCCCTGAGCAGGTGCAGCAGGTCAT
CATCTTCCAGGGCTACGACGGGGAGTTTGCCCTGGACCCCTCGGTGGAGGAGACGGCCGCCGCCACGCTG
CAGACGCTGGCCATGGCCGGCCAGGTGGCCCGGGTGGTGCATATCACGGAGGATGGCCAGGTCATCGCCA
CGAGTCAGAGCGGGGCACATGTAGGCAGCGTGGTGCCCGGACCCATCCTCCCCGAGCAGCTGGCTGATGG
AGCCACCCAGGTGGTCGTCGTGGGGGGCTCCATGGAAGGCCACGGCATGGATGAGTCCCTCAGTCCAGGT
GGCGCTGTGATACAACAGGTGACCAAGCAGGAGATTTTAAACCTCTCGGAGGCTGGAGTCGCTCCCCCCG
AGGCATCCTCAGCCCTGGATGCATTGCTCTGTGCGGTCACTGAATTAGGGGAGGTGGAGGGCAGGGCTGG
GCTCGAGGAGCAAGGCAGGCCCGGCGCCAAAGACGTGCTGATCCAGCTGCCCGGGCAGGAGGTCTCCCAT
GTGGCTGCCGACCCCGAGGCCCCCGAGATCCAGATGTTCCCACAGGCCCAGGAGAGCCCGGCCGCCGTGG
AGGTGCTCACCCAGGTGGTCCATCCCTCAGCAGCCATGGCCTCTCAGGAGCGGGCACAGGTGGCCTTCAA
GAAGATGGTCCAGGGCGTCCTCCAGTTTGCTGTGTGTGACACGGCCGCGGCCGGCCAGTTGGTCAAGGAC
GGTGTCACCCAGGTGGTGGTGAGCGAAGAGGGTGCCGTCCACATGGTCGCCGGGGAGGGTGCCCAGATCA
TCATGCAGGAGGCGCAGGGCGAGCACATGGATCTGGTGGAGTCCGACGGGGAGATCTCGCAGATCATCGT
GACGGAGGAGCTGGTCCAGGCCATGGTGCAGGAGTCCAGTGGCGGCTTCTCCGAGGGCACCACGCACTAC
ATCCTGACAGAGCTGCCCCCAGGGGTGCAGGACGAGCCGGGCCTGTACTCCCACACCGTGCTGGAGACTG
CGGACTCGCAGGAACTCCTGCAGGCCGGGGCCACGCTAGGCACAGAGGCCGGGGCCCCAAGCAGGGCAGA
GCAGCTGGCCAGCGTGGTCATCTACACCCAGGAGGGCTCCTCGGCCGCGGCGGCAATTCAGAGCCAAAGA
GAAAGCAGCGAACTCCAGGAAGCATGA

Translation (2248 aa):
MMDSENKPENDEDEKINKEAQDLTKLSSHNEDGGPVSDVIASFPENSMGKRGFSESSNSDSVVIGEDRNK
HASKRRKLDEAEPLKSGKQGICRLETSESSVTEGGIALDETGKETFLSDCTVGGTCLPNALSPSCNFSTI
DVVSLKTDTEKTSAQEMVSLDLERESPFPPKEISVSCTIGNVDTVLKCSICGHLFSSCSDLEKHAESHMQ
QPKEHTCCHCSHKAESSSALHMHIKQAHGPQKVFSCDLCGFQCSEENLLNAHYLGKTHLRRQNLAARGGF
VQILTKQPFPKKSRTMATKNVHSKPRTSKSIAKNSDSKGLRNVGSTFKDFRGSISKQSGSSSELLVEMMP
SRNTLSQEVEIVEEHVTSLGLAQNPENQSRKLDTLVTSEGLLEKLESTKNTLQAAHGNSVTSRPRPERNI
LVLGNSFRRRSSTFTLKGQAKKRFNLLGIKRGTSETQRMYMKHLRTQMKTHDAESVLKHLEACSSVQRVC
VTTSETQEAEQGQGSARPPDSGLHSLTVKPASGSQTLCACTDCGQVATNRTDLEIHVKRCHAREMKFYCR
TCDFSSMSRRDLDEHLHSNQHQQTASVLSCQCCSFISLDEINLRDHMKEKHNMHFLCTPCNLFFLSEKDV
EEHKATEKHINSLVQPKTLQSSNSDLVLQTLPLSTLESENAKESMDDSGKASQEEPLKSRVSHGNEVRHS
SKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKNNIGLS
FEECIERVCIGANDKKEEFDVSGNGRIEGHIGVQLQEHSYLEKGMLASEELSQSGGSTKDDELASTTTPK
RGRPKGNISRTCSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIE
ASGKHSSDIIVGPEGGSLEAGKKNAGSAVTMSDEHANKPAESPTSVLEKPDRGNSIEAEVENVFHSLDGE
VNSHLLDKKEQISSEPEDFAQPGDVYSQRDVTGTGENKCLHCEFSAHSSASLELHVKRKHTKEFEFYCMA
CDYYAVTRREMTRHAATEKHKMKRQSYLNSANVEAGSADMSKNIIMPEEEHQQNSEEFQIISGQPSDTLK
SRNAADCSILNENTNLDMSKVLCAADSVEVETEEESNFNEDHSFCETFQQAPVKDKVRKPEEMMSLTMSS
NYGSPSRFQNENSGSSALNCETAKKNHEISNDAGELRVHCEGEGGNAGDGGGVVPHRHLCPVTLDGERSA
ESPVLVVTRITREQGNLESGGQNRVARGHGLEDLKGVQEDPVLGNKEILMNSQHETEFILEEDGPASDST
VESSDVYETIISIDDKGQAMYSFGRFDSSIIRIKNPEDGELIDQSEEGLIATGVRISELPLKDCAQGVKK
KKSEGSSIGESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMR
NEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCK
YCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHL
NTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHMKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTH
TGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYR
SNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNVPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRL
KGQGATFVETDSPFTAAALAEEPLVKEKPLRSSRRPAPPPEQVQQVIIFQGYDGEFALDPSVEETAAATL
QTLAMAGQVARVVHITEDGQVIATSQSGAHVGSVVPGPILPEQLADGATQVVVVGGSMEGHGMDESLSPG
GAVIQQVTKQEILNLSEAGVAPPEASSALDALLCAVTELGEVEGRAGLEEQGRPGAKDVLIQLPGQEVSH
VAADPEAPEIQMFPQAQESPAAVEVLTQVVHPSAAMASQERAQVAFKKMVQGVLQFAVCDTAAAGQLVKD
GVTQVVVSEEGAVHMVAGEGAQIIMQEAQGEHMDLVESDGEISQIIVTEELVQAMVQESSGGFSEGTTHY
ILTELPPGVQDEPGLYSHTVLETADSQELLQAGATLGTEAGAPSRAEQLASVVIYTQEGSSAAAAIQSQR
ESSELQEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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