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Report for CCDS66776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66776.1 Public Homo sapiens 15 TEX9 24 110 108 CCDS HistoryNCBI Gene:374618Re-query CCDS DB by CCDS ID:66776.1Re-query CCDS DB by GeneID:374618See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000560827.6 ENSP00000452791.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000560827.6Link to Ensembl Protein Viewer:ENSP00000452791.2Re-query CCDS DB by Nucleotide ID:ENST00000560827Re-query CCDS DB by Protein ID:ENSP00000452791
Original member Current member NCBI NM_001286449.2 NP_001273378.1 Accepted alive Link to Nucleotide Sequence:NM_001286449.2Link to Protein Sequence:NP_001273378.1Re-query CCDS DB by Nucleotide ID:NM_001286449Re-query CCDS DB by Protein ID:NP_001273378Link to BLAST:NP_001273378.1
Original member Current member NCBI NM_001385040.1 NP_001371969.1 Accepted alive Link to Nucleotide Sequence:NM_001385040.1Link to Protein Sequence:NP_001371969.1Re-query CCDS DB by Nucleotide ID:NM_001385040Re-query CCDS DB by Protein ID:NP_001371969Link to BLAST:NP_001371969.1
Original member Current member NCBI NM_001385041.1 NP_001371970.1 Accepted alive Link to Nucleotide Sequence:NM_001385041.1Link to Protein Sequence:NP_001371970.1Re-query CCDS DB by Nucleotide ID:NM_001385041Re-query CCDS DB by Protein ID:NP_001371970Link to BLAST:NP_001371970.1
Original member Current member NCBI NM_001385042.1 NP_001371971.1 Accepted alive Link to Nucleotide Sequence:NM_001385042.1Link to Protein Sequence:NP_001371971.1Re-query CCDS DB by Nucleotide ID:NM_001385042Re-query CCDS DB by Protein ID:NP_001371971Link to BLAST:NP_001371971.1
Original member Current member NCBI NM_001385043.1 NP_001371972.1 Accepted alive Link to Nucleotide Sequence:NM_001385043.1Link to Protein Sequence:NP_001371972.1Re-query CCDS DB by Nucleotide ID:NM_001385043Re-query CCDS DB by Protein ID:NP_001371972Link to BLAST:NP_001371972.1
Original member Current member NCBI NM_001385044.1 NP_001371973.1 Accepted alive Link to Nucleotide Sequence:NM_001385044.1Link to Protein Sequence:NP_001371973.1Re-query CCDS DB by Nucleotide ID:NM_001385044Re-query CCDS DB by Protein ID:NP_001371973Link to BLAST:NP_001371973.1
Original member Current member NCBI NM_001385045.1 NP_001371974.1 Accepted alive Link to Nucleotide Sequence:NM_001385045.1Link to Protein Sequence:NP_001371974.1Re-query CCDS DB by Nucleotide ID:NM_001385045Re-query CCDS DB by Protein ID:NP_001371974Link to BLAST:NP_001371974.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273378.1 316 Q8N6V9-2 316 100% 0 0
NP_001371969.1 316 Q8N6V9-2 316 100% 0 0
NP_001371970.1 316 Q8N6V9-2 316 100% 0 0
NP_001371971.1 316 Q8N6V9-2 316 100% 0 0
NP_001371972.1 316 Q8N6V9-2 316 100% 0 0
NP_001371973.1 316 Q8N6V9-2 316 100% 0 0
NP_001371974.1 316 Q8N6V9-2 316 100% 0 0

Chromosomal Locations for CCDS 66776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 56383994 56384031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56388472 56388520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56389318 56389400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56391243 56391418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56394165 56394247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56394661 56394834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56412302 56412436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56427605 56427739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56428367 56428444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGAAATCATGTGATGACGAAGATGATTACAGTTTAAGAGGTCTGTTACCATCTGAAGGGATAGTTCATC
TTCATTCAGAAACTAAGCCAAAGACCAAAAACATTGATCCTGTAAACAAGGTTCAAAACAAATTACACTC
TGCAAATAAAGGAAGGAAAACAAATTCAAGTGTTAAATTGAAATACTCTGATGTCCAAACTGCCGACGAT
GTTGCCATTCCAGAGGATTTCTCAGACTTTTCCCTTGCAAAAACAATTAGCAAAATTGAAGGGCAACTGG
AGGAAGAAGGCTTACCTGAATATATAGATGATATTTTTTCTGGTGTTAGTAATGACATTGGAACAGAAGC
ACAGATCAGATTTCTAAAGGCCAAACTCCATGTTATGCAGGAGGAATTGGATAATGTTGTATGTGAATGC
AATAAAAAGGAGGATGAAATTCAGAATTTAAAGTCTCAAGTAAAAAATTTTGAAGAAGATTTTATGAGAC
AGCAGCGAACAATTAATATGCAACAGTCTCAAGTAGAAAAATACAAAACTCTTTTCGAAGAAGCAAACAA
AAAGTATGATGGATTACAGCAACAGTTGTCTTCAGTAGAAAGGGAATTAGAAAATAAAAGAAGACTGCAA
AAACAGGCTGCAAGTAGTCAAAGTGCCACAGAGGTTCGCTTGAATAGAGCTCTAGAAGAAGCAGAAAAGT
ATAAACTGGAGTTAAGTAAATTAAGGCAAAATAACAAGGACATAGCAAATGAAGAACACAAAAAAATTGA
AGTGTTAAAATCAGAAAACAAGAAGCTAGAAAAACAAAAAGGAGAATTAATGATAGGGTTCAAGAAACAG
TTAAAATTAATTGATGTTTTAAAAAGGCAAAAGATGCATATTGAAGCTGCCAAGATGCTATCTTTCACTG
AGGAGGAATTTATGAAAGCACTTGAATGGGGAAATTCATAA

Translation (316 aa):
MKSCDDEDDYSLRGLLPSEGIVHLHSETKPKTKNIDPVNKVQNKLHSANKGRKTNSSVKLKYSDVQTADD
VAIPEDFSDFSLAKTISKIEGQLEEEGLPEYIDDIFSGVSNDIGTEAQIRFLKAKLHVMQEELDNVVCEC
NKKEDEIQNLKSQVKNFEEDFMRQQRTINMQQSQVEKYKTLFEEANKKYDGLQQQLSSVERELENKRRLQ
KQAASSQSATEVRLNRALEEAEKYKLELSKLRQNNKDIANEEHKKIEVLKSENKKLEKQKGELMIGFKKQ
LKLIDVLKRQKMHIEAAKMLSFTEEEFMKALEWGNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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