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Report for CCDS757.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
757.2 Public Homo sapiens 1 PLPPR4 24 110 108 CCDS HistoryNCBI Gene:9890Re-query CCDS DB by CCDS ID:757.2Re-query CCDS DB by GeneID:9890See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 757.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370185.9 ENSP00000359204.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370185.9Link to Ensembl Protein Viewer:ENSP00000359204.4Re-query CCDS DB by Nucleotide ID:ENST00000370185Re-query CCDS DB by Protein ID:ENSP00000359204
Original member Current member NCBI NM_014839.5 NP_055654.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014839.5Link to Protein Sequence:NP_055654.3Re-query CCDS DB by Nucleotide ID:NM_014839Re-query CCDS DB by Protein ID:NP_055654Link to BLAST:NP_055654.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055654.3 715 Q7Z2D5-4 715 100% 0 0

Chromosomal Locations for CCDS 757.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 99264594 99264671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99287965 99288150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99296738 99296867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99299035 99299230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99300909 99300966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99301724 99301897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99305685 99307010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2148 nt):
ATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTGATCAAGGACAGCGTCACCCTCCTGCCCTGCTTTTATT
TCGTCGAGTTGCCTATATTGGCATCATCGGTGGTTAGCCTCTATTTCCTCGAACTCACAGATGTCTTCAA
ACCTGTGCACTCTGGATTTAGCTGCTATGACCGGAGTCTTAGCATGCCGTACATTGAACCAACCCAGGAG
GCAATTCCATTCCTCATGTTGCTTAGCTTGGCTTTTGCTGGACCTGCAATTACGATTATGGTAGGAGAAG
GAATTCTCTACTGTTGCCTCTCCAAAAGAAGAAATGGGGTCGGACTAGAGCCCAACATTAATGCTGGAGG
CTGCAACTTCAATTCCTTCCTCAGACGAGCTGTCAGATTCGTTGGTGTTCATGTATTTGGATTATGCTCT
ACAGCTCTCATTACAGATATCATACAGCTGTCCACAGGATATCAAGCACCTTACTTTCTGACTGTGTGCA
AACCAAACTATACCTCTCTGAATGTATCTTGCAAAGAAAATTCCTACATTGTGGAAGATATTTGCTCAGG
ATCTGACCTCACAGTTATCAACAGTGGCAGAAAGTCCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTT
GCAGCTGTGTATGTTTCGATGTACTTCAATTCCACATTAACGGATTCCTCTAAGCTTCTGAAACCTCTCT
TGGTCTTCACATTTATCATCTGTGGAATAATCTGCGGGCTAACACGGATAACTCAGTATAAGAACCACCC
AGTTGATGTCTATTGTGGCTTTTTAATAGGAGGAGGAATTGCACTGTACTTGGGCTTGTATGCTGTGGGG
AATTTCCTGCCCAGTGATGAGAGTATGTTTCAGCACAGAGACGCCCTCAGGTCTCTGACAGACCTCAATC
AAGATCCCAACCGACTTTTATCTGCTAAAAATGGTAGCAGCAGTGATGGAATTGCTCATACAGAAGGCAT
CCTCAACCGAAACCACAGAGATGCTAGCTCTCTGACAAATCTCAAAAGAGCAAATGCTGATGTGGAAATC
ATTACTCCACGGAGCCCCATGGGGAAGGAGAACATGGTTACCTTCAGCAATACCTTGCCGCGAGCCAATA
CCCCATCTGTAGAAGACCCTGTCAGAAGAAATGCGAGCATTCATGCCTCTATGGATTCCGCTCGATCAAA
GCAGCTCCTCACCCAGTGGAAGAATAAGAATGAAAGTCGAAAGTTGTCCTTGCAAGTTATAGAGCCTGAG
CCTGGGCAGTCACCACCCAGATCCATAGAAATGAGGTCAAGCTCAGAGCCATCGAGGGTAGGGGTGAATG
GAGACCACCATGGTCCTGGCAATCAGTACCTCAAAATCCAGCCTGGCGCTGTCCCCGGATGTAACAACAG
CATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATCCCTGAG
GAGACTCAGGAAAACATAAGCACCTCCCCCAAAAGCAGCTCTGCTCGGGCCAAGTGGTTAAAAGCTGCTG
AAAAGACTGTGGCCTGTAACAGAAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCA
GCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGC
TATAAAACCTTGACAGACCATGAGCCCAGTGGGATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAGGC
CCATCATACAGATCCCGTCCACTGAAGGTGAAGGCAGTGGCTCCTGGAAGTGGAAAGCCCCTGAAAAGGG
CAGCCTTCGCCAAACTTACGAGCTCAACGATCTCAACAGGGACTCAGAAAGCTGTGAGTCTCTGAAAGAC
AGCTTTGGTTCTGGAGATCGCAAGAGAAGCAACATTGATAGCAATGAGCATCACCACCACGGAATTACCA
CCATCCGCGTCACCCCAGTAGAGGGCAGCGAAATTGGCTCAGAGACGCTGTCCATTTCTTCTTCCCGCGA
CTCCACCCTGCGGAGAAAGGGCAATATCATTCTAATCCCTGAAAGAAGCAACAGCCCCGAAAACACTAGA
AATATCTTCTACAAAGGAACCTCCCCCACACGGGCTTATAAGGATTGA

Translation (715 aa):
MSAKERPKGKVIKDSVTLLPCFYFVELPILASSVVSLYFLELTDVFKPVHSGFSCYDRSLSMPYIEPTQE
AIPFLMLLSLAFAGPAITIMVGEGILYCCLSKRRNGVGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCS
TALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGRKSFPSQHATLAAF
AAVYVSMYFNSTLTDSSKLLKPLLVFTFIICGIICGLTRITQYKNHPVDVYCGFLIGGGIALYLGLYAVG
NFLPSDESMFQHRDALRSLTDLNQDPNRLLSAKNGSSSDGIAHTEGILNRNHRDASSLTNLKRANADVEI
ITPRSPMGKENMVTFSNTLPRANTPSVEDPVRRNASIHASMDSARSKQLLTQWKNKNESRKLSLQVIEPE
PGQSPPRSIEMRSSSEPSRVGVNGDHHGPGNQYLKIQPGAVPGCNNSMPGGPRVSIQSRPGSSQLVHIPE
ETQENISTSPKSSSARAKWLKAAEKTVACNRSNSQPRIMQVIAMSKQQGVLQSSPKNTEGSTVSCTGSIR
YKTLTDHEPSGIVRVEAHPENNRPIIQIPSTEGEGSGSWKWKAPEKGSLRQTYELNDLNRDSESCESLKD
SFGSGDRKRSNIDSNEHHHHGITTIRVTPVEGSEIGSETLSISSSRDSTLRRKGNIILIPERSNSPENTR
NIFYKGTSPTRAYKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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