NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS34219.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34219.1 Public Homo sapiens 5 ZNF608 24 110 108 CCDS HistoryNCBI Gene:57507Re-query CCDS DB by CCDS ID:34219.1Re-query CCDS DB by GeneID:57507See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34219.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306315.9 ENSP00000307746.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000306315.9Link to Ensembl Protein Viewer:ENSP00000307746.5Re-query CCDS DB by Nucleotide ID:ENST00000306315Re-query CCDS DB by Protein ID:ENSP00000307746
Original member Current member EBI ENST00000513986.2 ENSP00000421899.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000513986.2Link to Ensembl Protein Viewer:ENSP00000421899.2Re-query CCDS DB by Nucleotide ID:ENST00000513986Re-query CCDS DB by Protein ID:ENSP00000421899
Original member Current member NCBI NM_001385619.1 NP_001372548.1 Accepted alive Link to Nucleotide Sequence:NM_001385619.1Link to Protein Sequence:NP_001372548.1Re-query CCDS DB by Nucleotide ID:NM_001385619Re-query CCDS DB by Protein ID:NP_001372548Link to BLAST:NP_001372548.1
Original member Current member NCBI NM_020747.3 NP_065798.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020747.3Link to Protein Sequence:NP_065798.2Re-query CCDS DB by Nucleotide ID:NM_020747Re-query CCDS DB by Protein ID:NP_065798Link to BLAST:NP_065798.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001372548.1 1512 Q9ULD9-1 1512 100% 0 0
NP_065798.2 1512 Q9ULD9-1 1512 100% 0 0

Chromosomal Locations for CCDS 34219.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 124637900 124637906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124639133 124639214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124641252 124641405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124643511 124643683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124644244 124644661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124646679 124649133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124649610 124649697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124701014 124701269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124744084 124744989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4539 nt):
ATGTCAGTGAACATTTCTACTGCAGGAAAAGGTGTGGATCCAAATACAGTTGATACTTATGACAGTGGCG
ATGATTGGGAAATCGGGGTTGGAAATTTAATAATTGATTTGGACGCTGATTTGGAGAAGGACAGACAGAA
ATTTGAGATGAATAATTCCACCACCACCACTAGTAGCAGCAACTCCAAGGATTGTGGAGGTCCGGCCTCC
AGTGGGGCTGGTGCTACCGCAGCCTTAGCTGATGGCCTAAAATTTGCTTCTGTTCAGGCCTCTGCTCCCC
AGGGGAATTCACACAAAGAGACCAGCAAATCAAAAGTGAAAAGGAGTAAAACTTCTAAGGATGCTAATAA
ATCTCTGCCTTCTGCTGCCTTGTATGGGATTCCCGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCAA
GGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCA
ACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCTCCTGTGGGAAAAG
CAAAGAGGAGAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGCGGGGAAATCC
AGGAAGGACAAGCACGACCTGCTTCAGGGCCACCAGAATGGCAGTGGCAGCCAGGCCCCTTCCGGGGGGC
ACCTCTATGGCTTTGGGGCCAAGAGCAATGGAGGTGGCGCGAGCCCCTTCCACTGCGGGGGCACTGGGAG
TGGCAGCGTCGCCGCTGCAGGGGAAGTTAGCAAAAGTGCCCCGGATTCAGGGCTCATGGGAAACTCTATG
TTGGTAAAGAAGGAAGAGGAGGAGGAGGAGAGCCACAGGCGAATCAAGAAACTGAAAACTGAGAAGGTTG
ACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGCAGTCTCACGCCTCAGATTCTACCCTC
CTACTTTTCCCCATCTTCATCCAATATTGCAGCACCGGTTGAACAGCTTTTGGTTCGGACTCGTTCTGTG
GGTGTCAATACATGTGAAGTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCCCTGTGAACCTGGGACCA
GTGTGAATTTGGAAGGGATCGTGTGGCATGAAACAGAAGAAGGTGTCCTAGTGGTCAATGTCACGTGGAG
GAACAAAACGTACGTGGGAACCCTACTGGACTGCACCAAGCACGACTGGGCCCCTCCCAGGTTTTGTGAG
TCACCGACAAGTGACCTGGAGATGAGAGGGGGCCGGGGCAGAGGGAAGAGAGCGAGGTCTGCTGCTGCTG
CCCCGGGCTCCGAGGCCAGCTTCACAGAGTCCAGAGGGCTGCAGAATAAGAACAGAGGGGGGGCCAATGG
GAAAGGGAGGCGGGGCAGCCTCAATGCCAGCGGACGAAGGACACCCCCAAATTGTGCTGCTGAGGATATC
AAAGCCAGCCCTTCCTCCACCAACAAAAGGAAAAACAAGCCTCCAATGGAGCTGGACCTGAACTCCAGCT
CTGAGGACAATAAGCCTGGAAAGCGTGTCCGCACAAATTCCAGAAGCACTCCCACTACCCCTCAAGGGAA
ACCAGAGACTACTTTTTTGGACCAAGGCTGCTCTTCTCCAGTGTTAATCGACTGTCCCCACCCAAACTGC
AACAAAAAGTACAAGCACATTAACGGCCTGAGGTACCACCAGGCTCATGCACACTTAGACCCAGAAAACA
AGCTGGAGTTCGAGCCTGACAGTGAGGACAAGATCTCGGACTGTGAGGAAGGATTGAGTAATGTGGCACT
TGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGTGCT
GGAAACCCACCTGGGACCCCAAAGGGAAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCATTATTGGTG
CTAAAGCTGGGAAGAATTCTGGCAAAAAGAAGGGCCTTAACAATGAACTGAACAACCTTCCAGTAATCTC
CAACATGACGGCTGCGTTAGACAGTTGCTCGGCAGCAGACGGCAGTTTGGCTGCTGAGATGCCTAAACTG
GAAGCAGAAGGATTAATTGACAAGAAAAATTTAGGAGATAAAGAAAAGGGCAAAAAAGCTACCAACTGCA
AAACGGACAAAAACCTCTCTAAACTGAAAAGTGCCCGGCCCATTGCCCCTGCCCCAGCCCCCACTCCCCC
GCAGCTAATCGCTATACCCACTGCAACCTTTACAACGACCACCACTGGGACAATACCCGGACTGCCCTCC
CTCACAACAACTGTTGTTCAGGCTACACCAAAGAGTCCTCCGTTAAAACCCATTCAACCAAAGCCCACAA
TTATGGGAGAGCCCATCACCGTGAACCCAGCTCTGGTGTCACTCAAAGACAAAAAGAAAAAGGAGAAGCG
AAAGCTAAAGGACAAAGAAGGGAAAGAGACGGGAAGCCCAAAAATGGATGCCAAGCTGGGGAAACTAGAG
GACTCCAAGGGGGCCAGCAAAGATTTACCTGGGCATTTTTTAAAGGATCATCTCAACAAGAATGAAGGGC
TGGCAAATGGACTGTCGGAGTCTCAGGAGAGCCGCATGGCCAGTATCAAAGCTGAGGCCGATAAGGTTTA
CACTTTCACAGACAACGCTCCCAGCCCTTCCATAGGGAGCGCCTCGAGGCTGGAATGCAGCACTTTGGTG
AACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAATGGGGCAGAGAGTTCAGCTGCAAAGA
CAAGCAGCCCGGCCTATTCAGACATATCTGATGCTGCTGACGATGGTGGTTCTGACAGCAGGTCGGAGGG
TATGAGATCAAAGGCCAGTTCCCCATCAGATATTATTTCTAGTAAGGACAGTGTTGTAAAAGGGCATTCT
TCAACTACAGCACAATCATCTCAACTGAAAGAGTCCCATTCTCCCTATTACCACAGCTATGATCCTTATT
ATTCTCCAAGTTACATGCACCCTGGGCAGGTCGGTGCCCCTGCAGCTGGAAATAGTGGGAGCACGCAGGG
AATGAAGATCAAGAAGGAGTCTGAGGAAGATGCTGAAAAGAAAGACAAGGCAGAGCAGTTAGATTCTAAG
AAAGTGGACCACAATTCTGCATCCTTACAGCCTCAGCACCAGTCGGTGATCACACAAAGACATCCTGCCC
TGGCTCAGTCACTTTATTATGGCCAGTATGCATATGGGCTCTATATGGACCAGAAGTCTCTGATGGCCAC
CAGCCCTGCCTATAGACAGCAGTATGAGAAGTACTATGAGGACCAGAGGCTGGCAGAGCAGAAAATGGCC
CAGACTGGGAGAGGAGACTGTGAAAGGAAAAGTGAGCTCCCCTTGAAAGAGCTGGGCAAGGAGGAAACTA
AACAGAAAAATATGCCATCGGCCACAATCTCAAAAGCTCCCTCTACTCCGGAGCCTAACAAAAACCATTC
TAAACTAGGGCCATCAGTGCCTAATAAAACTGAGGAGACAGGTAAATCGCAGCTTCTCTCCAATCACCAG
CAGCAGCTTCAGGCCGACAGCTTCAAAGCTAAGCAGATGGAAAACCACCAGCTTATTAAGGAGGCTGTAG
AAATGAAGTCTGTCATGGACTCTATGAAGCAGACAGGTGTAGACCCAACCTCGAGATTTAAACAAGACCC
AGATTCAAGAACATGGCATCATTATGTATACCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGAACTT
GATAGAGAGAAGAAATTAAAAGAGGATAGTCCGAGGAAAACTCCTAATAAAGAGAGTGGTGTGCCCAGCC
TTCCTGTATCGTTAACAAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCCTGATTCTCAATCAATGGA
GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAACAAGAGTG
GCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACCCACAGA
TGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCCTAATGCACAGTTATCCTGGGGCATA
TCTCTCTCCAGGATTTCATTATCCTGTTTATGGGAAGATGTCAGGGAGAGAAGAGACAGAGAAAGTCAAT
ACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTA
ACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGCTACAGCTGAGCGGGAACGGGAGGCAGAAAG
GGAAAGGGATCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACACGCACCACCACACCCACGTTGGCATG
GGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCTTGACCTCTGCTGCCCTTGTTGCCTCTC
AGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATGTTTCCTGGACAAAGAAGAGAATAA

Translation (1512 aa):
MSVNISTAGKGVDPNTVDTYDSGDDWEIGVGNLIIDLDADLEKDRQKFEMNNSTTTTSSSNSKDCGGPAS
SGAGATAALADGLKFASVQASAPQGNSHKETSKSKVKRSKTSKDANKSLPSAALYGIPEISSTGKRQEVQ
GRPGEATGMNSALGQSVSSGGSGNPNSNSTSTSTSAATAGAGSCGKSKEEKPGKSQSSRGAKRDKDAGKS
RKDKHDLLQGHQNGSGSQAPSGGHLYGFGAKSNGGGASPFHCGGTGSGSVAAAGEVSKSAPDSGLMGNSM
LVKKEEEEEESHRRIKKLKTEKVDPLFTVPAPPPPISSSLTPQILPSYFSPSSSNIAAPVEQLLVRTRSV
GVNTCEVGVVTEPECLGPCEPGTSVNLEGIVWHETEEGVLVVNVTWRNKTYVGTLLDCTKHDWAPPRFCE
SPTSDLEMRGGRGRGKRARSAAAAPGSEASFTESRGLQNKNRGGANGKGRRGSLNASGRRTPPNCAAEDI
KASPSSTNKRKNKPPMELDLNSSSEDNKPGKRVRTNSRSTPTTPQGKPETTFLDQGCSSPVLIDCPHPNC
NKKYKHINGLRYHQAHAHLDPENKLEFEPDSEDKISDCEEGLSNVALECSEPSTSVSAYDQLKAPASPGA
GNPPGTPKGKRELMSNGPGSIIGAKAGKNSGKKKGLNNELNNLPVISNMTAALDSCSAADGSLAAEMPKL
EAEGLIDKKNLGDKEKGKKATNCKTDKNLSKLKSARPIAPAPAPTPPQLIAIPTATFTTTTTGTIPGLPS
LTTTVVQATPKSPPLKPIQPKPTIMGEPITVNPALVSLKDKKKKEKRKLKDKEGKETGSPKMDAKLGKLE
DSKGASKDLPGHFLKDHLNKNEGLANGLSESQESRMASIKAEADKVYTFTDNAPSPSIGSASRLECSTLV
NGQAPMAPLHVLTQNGAESSAAKTSSPAYSDISDAADDGGSDSRSEGMRSKASSPSDIISSKDSVVKGHS
STTAQSSQLKESHSPYYHSYDPYYSPSYMHPGQVGAPAAGNSGSTQGMKIKKESEEDAEKKDKAEQLDSK
KVDHNSASLQPQHQSVITQRHPALAQSLYYGQYAYGLYMDQKSLMATSPAYRQQYEKYYEDQRLAEQKMA
QTGRGDCERKSELPLKELGKEETKQKNMPSATISKAPSTPEPNKNHSKLGPSVPNKTEETGKSQLLSNHQ
QQLQADSFKAKQMENHQLIKEAVEMKSVMDSMKQTGVDPTSRFKQDPDSRTWHHYVYQPKYLDQQKSEEL
DREKKLKEDSPRKTPNKESGVPSLPVSLTSIKEEPKEAKHPDSQSMEESKLKNDDRKTPVNWKDSRGTRV
AVSSPMSQHQSYIQYLHAYPYPQMYDPSHPAYRAVSPVLMHSYPGAYLSPGFHYPVYGKMSGREETEKVN
TSPSVNTKTTTESKALDLLQQHANQYRSKSPAPVEKATAEREREAERERDRHSPFGQRHLHTHHHTHVGM
GYPLIPGQYDPFQGLTSAALVASQQVAAQASASGMFPGQRRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH