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Report for CCDS48114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48114.1 Public Homo sapiens X GAGE2A 24 110 108 CCDS HistoryNCBI Gene:729447Re-query CCDS DB by CCDS ID:48114.1Re-query CCDS DB by GeneID:729447See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48114.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000362097.2 ENSP00000355421.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000362097.2Link to Ensembl Protein Viewer:ENSP00000355421.1Re-query CCDS DB by Nucleotide ID:ENST00000362097Re-query CCDS DB by Protein ID:ENSP00000355421
Original member Current member NCBI NM_001127212.4 NP_001120684.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001127212.4Link to Protein Sequence:NP_001120684.1Re-query CCDS DB by Nucleotide ID:NM_001127212Re-query CCDS DB by Protein ID:NP_001120684Link to BLAST:NP_001120684.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120684.1 116 Q6NT46 116 100% 0 0

Chromosomal Locations for CCDS 48114.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 49590651 49590731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49591197 49591317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49594118 49594243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49596711 49596733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGAGTTGGCGAGGAAGATCGACCTATCGGCCTAGACCAAGACGCTACGTAGAGCCTCCTGAAATGATTG
GGCCTATGCGGCCCGAGCAGTTCAGTGATGAAGTGGAACCAGCAACACCTGAAGAAGGGGAACCAGCAAC
TCAACGTCAGGATCCTGCAGCTGCTCAGGAGGGACAGGATGAGGGAGCATCTGCAGGTCAAGGGCCGAAG
CCTGAAGCTCATAGCCAGGAACAGGGTCACCCACAGACTGGGTGTGAGTGTGAAGATGGTCCTGATGGGC
AGGAGATGGACCCGCCAAATCCAGAGGAGGTGAAAACGCCTGAAGAAGGTGAAAAGCAATCACAGTGTTA
A

Translation (116 aa):
MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPK
PEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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