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Report for CCDS8312.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8312.1 Public Homo sapiens 11 ANGPTL5 24 110 108 CCDS HistoryNCBI Gene:253935Re-query CCDS DB by CCDS ID:8312.1Re-query CCDS DB by GeneID:253935See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8312.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334289.7 ENSP00000335255.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334289.7Link to Ensembl Protein Viewer:ENSP00000335255.3Re-query CCDS DB by Nucleotide ID:ENST00000334289Re-query CCDS DB by Protein ID:ENSP00000335255
Original member Current member NCBI NM_178127.5 NP_835228.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178127.5Link to Protein Sequence:NP_835228.2Re-query CCDS DB by Nucleotide ID:NM_178127Re-query CCDS DB by Protein ID:NP_835228Link to BLAST:NP_835228.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835228.2 388 Q86XS5 388 100% 0 0

Chromosomal Locations for CCDS 8312.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 101891279 101891598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101894879 101895064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101900430 101900550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101902621 101902721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101904814 101904907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101905744 101905847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101907103 101907247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101907814 101907909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGATGTCTCCATCCCAAGCCTCACTCTTATTCTTAAATGTATGTATTTTTATTTGTGGAGAAGCTGTAC
AAGGTAACTGTGTACATCATTCTACGGACTCTTCAGTAGTTAACATTGTAGAAGATGGATCTAATGCAAA
AGATGAAAGTAAAAGTAATGATACTGTTTGTAAGGAAGACTGTGAGGAATCATGTGATGTTAAAACTAAA
ATTACACGAGAAGAAAAACATTTCATGTGTAGAAATTTGCAAAATTCTATTGTTTCCTACACAAGAAGTA
CCAAAAAACTACTAAGGAATATGATGGATGAGCAACAAGCTTCCTTGGATTATTTATCTAATCAGGTTAA
CGAGCTCATGAATAGAGTTCTCCTTTTGACTACAGAAGTTTTTAGAAAACAGCTGGATCCTTTTCCTCAC
AGACCTGTTCAGTCACATGGTTTAGATTGCACTGATATTAAGGATACCATTGGCTCTGTCACCAAAACAC
CGAGTGGTTTATACATAATTCACCCAGAAGGATCTAGCTACCCATTTGAGGTAATGTGTGACATGGATTA
CAGAGGAGGTGGACGGACTGTGATACAGAAAAGAATTGATGGGATAATTGATTTCCAGAGGTTGTGGTGT
GATTATCTGGATGGATTTGGAGATCTTCTAGGAGAATTTTGGCTAGGACTGAAAAAGATTTTTTATATAG
TAAATCAGAAAAATACCAGTTTTATGCTGTATGTGGCTTTGGAATCTGAAGATGACACTCTTGCTTATGC
ATCATATGATAATTTTTGGCTAGAGGATGAAACGAGATTTTTTAAAATGCACTTAGGACGGTATTCAGGA
AATGCTGGTGATGCATTCCGGGGTCTCAAAAAAGAAGATAATCAAAATGCAATGCCTTTTAGCACATCAG
ATGTTGATAATGATGGGTGTCGCCCTGCATGCCTGGTCAATGGTCAGTCTGTGAAGAGCTGCAGTCACCT
CCATAACAAGACCGGCTGGTGGTTTAACGAGTGTGGTCTAGCAAATCTAAATGGCATTCATCACTTCTCT
GGAAAATTGCTTGCAACTGGAATTCAATGGGGCACGTGGACCAAAAACAACTCACCTGTCAAGATTAAAT
CTGTTTCAATGAAAATTAGAAGAATGTACAATCCATATTTTAAATAA

Translation (388 aa):
MMSPSQASLLFLNVCIFICGEAVQGNCVHHSTDSSVVNIVEDGSNAKDESKSNDTVCKEDCEESCDVKTK
ITREEKHFMCRNLQNSIVSYTRSTKKLLRNMMDEQQASLDYLSNQVNELMNRVLLLTTEVFRKQLDPFPH
RPVQSHGLDCTDIKDTIGSVTKTPSGLYIIHPEGSSYPFEVMCDMDYRGGGRTVIQKRIDGIIDFQRLWC
DYLDGFGDLLGEFWLGLKKIFYIVNQKNTSFMLYVALESEDDTLAYASYDNFWLEDETRFFKMHLGRYSG
NAGDAFRGLKKEDNQNAMPFSTSDVDNDGCRPACLVNGQSVKSCSHLHNKTGWWFNECGLANLNGIHHFS
GKLLATGIQWGTWTKNNSPVKIKSVSMKIRRMYNPYFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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