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Report for CCDS2244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2244.1 Public Homo sapiens 2 CYBRD1 24 110 108 CCDS HistoryNCBI Gene:79901Re-query CCDS DB by CCDS ID:2244.1Re-query CCDS DB by GeneID:79901See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2244.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321348.9 ENSP00000319141.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321348.9Link to Ensembl Protein Viewer:ENSP00000319141.4Re-query CCDS DB by Nucleotide ID:ENST00000321348Re-query CCDS DB by Protein ID:ENSP00000319141
Original member Current member NCBI NM_024843.4 NP_079119.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024843.4Link to Protein Sequence:NP_079119.3Re-query CCDS DB by Nucleotide ID:NM_024843Re-query CCDS DB by Protein ID:NP_079119Link to BLAST:NP_079119.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079119.3 286 Q53TN4-1 286 100% 0 0

Chromosomal Locations for CCDS 2244.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 171522546 171522738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171541585 171541793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171553346 171553500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171554524 171554827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (861 nt):
ATGGCCATGGAGGGCTACTGGCGCTTCCTGGCGCTGCTGGGGTCGGCACTGCTCGTCGGCTTCCTGTCGG
TGATCTTCGCCCTCGTCTGGGTCCTCCACTACCGAGAGGGGCTTGGCTGGGATGGGAGCGCACTAGAGTT
TAACTGGCACCCAGTGCTCATGGTCACCGGCTTCGTCTTCATCCAGGGCATCGCCATCATCGTCTACAGA
CTGCCGTGGACCTGGAAATGCAGCAAGCTCCTGATGAAATCCATCCATGCAGGGTTAAATGCAGTTGCTG
CCATTCTTGCAATTATCTCTGTGGTGGCCGTGTTTGAGAACCACAATGTTAACAATATAGCCAATATGTA
CAGTCTGCACAGCTGGGTTGGACTGATAGCTGTCATATGCTATTTGTTACAGCTTCTTTCAGGTTTTTCA
GTCTTTCTGCTTCCATGGGCTCCGCTTTCTCTCCGAGCATTTCTCATGCCCATACATGTTTATTCTGGAA
TTGTCATCTTTGGAACAGTGATTGCAACAGCACTTATGGGATTGACAGAGAAACTGATTTTTTCCCTGAG
AGATCCTGCATACAGTACATTCCCGCCAGAAGGTGTTTTCGTAAATACGCTTGGCCTTCTGATCCTGGTG
TTCGGGGCCCTCATTTTTTGGATAGTCACCAGACCGCAATGGAAACGTCCTAAGGAGCCAAATTCTACCA
TTCTTCATCCAAATGGAGGCACTGAACAGGGAGCAAGAGGTTCCATGCCAGCCTACTCTGGCAACAACAT
GGACAAATCAGATTCAGAGTTAAACAGTGAAGTAGCAGCAAGGAAAAGAAACTTAGCTCTGGATGAGGCT
GGGCAGAGATCTACCATGTAA

Translation (286 aa):
MAMEGYWRFLALLGSALLVGFLSVIFALVWVLHYREGLGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYR
LPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLSGFS
VFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAYSTFPPEGVFVNTLGLLILV
FGALIFWIVTRPQWKRPKEPNSTILHPNGGTEQGARGSMPAYSGNNMDKSDSELNSEVAARKRNLALDEA
GQRSTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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