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Report for CCDS32688.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32688.1 Public Homo sapiens 17 OR4D2 24 110 108 CCDS HistoryNCBI Gene:124538Re-query CCDS DB by CCDS ID:32688.1Re-query CCDS DB by GeneID:124538See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32688.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000545221.2 ENSP00000441354.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000545221.2Link to Ensembl Protein Viewer:ENSP00000441354.1Re-query CCDS DB by Nucleotide ID:ENST00000545221Re-query CCDS DB by Protein ID:ENSP00000441354
Original member Current member EBI ENST00000641866.1 ENSP00000493137.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641866.1Link to Ensembl Protein Viewer:ENSP00000493137.1Re-query CCDS DB by Nucleotide ID:ENST00000641866Re-query CCDS DB by Protein ID:ENSP00000493137
Original member Current member NCBI NM_001004707.4 NP_001004707.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004707.4Link to Protein Sequence:NP_001004707.1Re-query CCDS DB by Nucleotide ID:NM_001004707Re-query CCDS DB by Protein ID:NP_001004707Link to BLAST:NP_001004707.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004707.1 307 P58180 307 100% 0 0

Chromosomal Locations for CCDS 32688.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58169656 58170579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGAAACAGGGAACCTCACGTGGGTATCAGACTTTGTCTTCCTGGGGCTCTCGCAGACTCGGGAGCTCC
AGCGTTTCCTGTTTCTAATGTTCCTGTTTGTCTACATCACCACTGTTATGGGAAACATCCTTATCATCAT
CACAGTGACCTCTGATTCCCAGCTCCACACACCCATGTACTTTCTGCTCCGAAACCTGGCTGTCCTAGAC
CTCTGTTTCTCTTCAGTCACTGCTCCCAAAATGCTAGTGGACCTCCTCTCTGAGAAGAAAACCATCTCTT
ACCAGGGCTGCATGGGTCAGATCTTCTTCTTCCACTTTTTGGGAGGTGCCATGGTCTTCTTCCTCTCAGT
GATGGCCTTTGACCGCCTCATTGCCATCTCCCGGCCCCTCCGCTATGTCACCGTCATGAACACTCAGCTC
TGGGTGGGGCTGGTGGTAGCCACCTGGGTGGGAGGCTTTGTCCACTCTATTGTCCAGCTGGCTCTGATGC
TCCCACTGCCCTTCTGTGGCCCCAACATTTTGGATAACTTCTACTGTGATGTTCCCCAAGTACTGAGACT
TGCCTGCACTGACACCTCACTGCTGGAGTTCCTCAAGATCTCCAACAGTGGGCTGCTGGATGTCGTCTGG
TTCTTCCTCCTCCTGATGTCCTACTTATTCATCCTGGTGATGCTGAGGTCACATCCAGGGGAGGCAAGAA
GGAAGGCAGCTTCCACCTGCACCACCCACATCATCGTGGTTTCCATGATCTTCGTTCCAAGCATTTACCT
CTATGCCCGGCCCTTCACTCCATTCCCTATGGACAAGCTTGTGTCCATCGGCCACACAGTCATGACCCCC
ATGCTCAACCCCATGATCTATACCCTGAGGAACCAGGACATGCAGGCAGCAGTGAGAAGATTAGGGAGAC
ACCGGCTGGTTTGA

Translation (307 aa):
METGNLTWVSDFVFLGLSQTRELQRFLFLMFLFVYITTVMGNILIIITVTSDSQLHTPMYFLLRNLAVLD
LCFSSVTAPKMLVDLLSEKKTISYQGCMGQIFFFHFLGGAMVFFLSVMAFDRLIAISRPLRYVTVMNTQL
WVGLVVATWVGGFVHSIVQLALMLPLPFCGPNILDNFYCDVPQVLRLACTDTSLLEFLKISNSGLLDVVW
FFLLLMSYLFILVMLRSHPGEARRKAASTCTTHIIVVSMIFVPSIYLYARPFTPFPMDKLVSIGHTVMTP
MLNPMIYTLRNQDMQAAVRRLGRHRLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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