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Report for CCDS91765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91765.1 Public Homo sapiens 12 ARL6IP4 24 110 108 CCDS HistoryNCBI Gene:51329Re-query CCDS DB by CCDS ID:91765.1Re-query CCDS DB by GeneID:51329See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91765.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357866.4 ENSP00000350532.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357866.4Link to Ensembl Protein Viewer:ENSP00000350532.4Re-query CCDS DB by Nucleotide ID:ENST00000357866Re-query CCDS DB by Protein ID:ENSP00000350532
Original member Current member NCBI NM_001278378.2 NP_001265307.2 Accepted alive Link to Nucleotide Sequence:NM_001278378.2Link to Protein Sequence:NP_001265307.2Re-query CCDS DB by Nucleotide ID:NM_001278378Re-query CCDS DB by Protein ID:NP_001265307Link to BLAST:NP_001265307.2
Original member Current member NCBI NM_001400285.1 NP_001387214.1 Accepted alive Link to Nucleotide Sequence:NM_001400285.1Link to Protein Sequence:NP_001387214.1Re-query CCDS DB by Nucleotide ID:NM_001400285Re-query CCDS DB by Protein ID:NP_001387214Link to BLAST:NP_001387214.1
Original member Current member NCBI NM_001400306.1 NP_001387235.1 Accepted alive Link to Nucleotide Sequence:NM_001400306.1Link to Protein Sequence:NP_001387235.1Re-query CCDS DB by Nucleotide ID:NM_001400306Re-query CCDS DB by Protein ID:NP_001387235Link to BLAST:NP_001387235.1
Original member Current member NCBI NM_001400312.1 NP_001387241.1 Accepted alive Link to Nucleotide Sequence:NM_001400312.1Link to Protein Sequence:NP_001387241.1Re-query CCDS DB by Nucleotide ID:NM_001400312Re-query CCDS DB by Protein ID:NP_001387241Link to BLAST:NP_001387241.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265307.2 181 Q66PJ3-5 181 100% 0 0
NP_001387214.1 181 Q66PJ3-5 181 100% 0 0
NP_001387235.1 181 Q66PJ3-5 181 100% 0 0
NP_001387241.1 181 Q66PJ3-5 181 100% 0 0

Chromosomal Locations for CCDS 91765.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 122981140 122981299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122981595 122981809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122982031 122982074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122982469 122982538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122982620 122982676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGACGGGGGTCGGAAAAGA
GAAAGAAGAAGAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAG
CACGGCCCCTGGGGCGGAGGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCTCC
TCTTCTTCCAGTTCTTCTAGCTCCTCTTCTTCCTCCTCGTCCTCCTCCTCTTCCTCCAGTGATGGCCGGA
AGAAGCGGGGGAAGTACAAGGACAAGAGGAGGAAGAAGAAGAAGAAGAGGAAGAAGCTGAAGAAGAAGGG
CAAGGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGG
CTTATTAAGGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGC
AAGCCACCCGAGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTTGCTTCCCTGA

Translation (181 aa):
MAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARRRTRSSSSS
SSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQSIIRKVVDPETGRTR
LIKGDGEVLEEIVTKERHREINKQATRGDCLAFQMRAGLLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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