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Report for CCDS11496.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11496.1 Public Homo sapiens 17 HEXIM2 24 110 108 CCDS HistoryNCBI Gene:124790Re-query CCDS DB by CCDS ID:11496.1Re-query CCDS DB by GeneID:124790See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11496.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307275.7 ENSP00000302276.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307275.7Link to Ensembl Protein Viewer:ENSP00000302276.2Re-query CCDS DB by Nucleotide ID:ENST00000307275Re-query CCDS DB by Protein ID:ENSP00000302276
Original member Current member EBI ENST00000591070.6 ENSP00000464807.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591070.6Link to Ensembl Protein Viewer:ENSP00000464807.2Re-query CCDS DB by Nucleotide ID:ENST00000591070Re-query CCDS DB by Protein ID:ENSP00000464807
Original member Current member EBI ENST00000586681.6 ENSP00000465086.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000586681.6Link to Ensembl Protein Viewer:ENSP00000465086.2Re-query CCDS DB by Nucleotide ID:ENST00000586681Re-query CCDS DB by Protein ID:ENSP00000465086
Original member Current member EBI ENST00000591576.5 ENSP00000465727.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591576.5Link to Ensembl Protein Viewer:ENSP00000465727.1Re-query CCDS DB by Nucleotide ID:ENST00000591576Re-query CCDS DB by Protein ID:ENSP00000465727
Original member Current member EBI ENST00000589230.6 ENSP00000466200.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000589230.6Link to Ensembl Protein Viewer:ENSP00000466200.2Re-query CCDS DB by Nucleotide ID:ENST00000589230Re-query CCDS DB by Protein ID:ENSP00000466200
Original member Current member EBI ENST00000592695.1 ENSP00000467517.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592695.1Link to Ensembl Protein Viewer:ENSP00000467517.1Re-query CCDS DB by Nucleotide ID:ENST00000592695Re-query CCDS DB by Protein ID:ENSP00000467517
Original member Current member EBI ENST00000585340.2 ENSP00000468251.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000585340.2Link to Ensembl Protein Viewer:ENSP00000468251.2Re-query CCDS DB by Nucleotide ID:ENST00000585340Re-query CCDS DB by Protein ID:ENSP00000468251
Original member Current member EBI ENST00000593138.6 ENSP00000468773.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593138.6Link to Ensembl Protein Viewer:ENSP00000468773.2Re-query CCDS DB by Nucleotide ID:ENST00000593138Re-query CCDS DB by Protein ID:ENSP00000468773
Original member Current member NCBI NM_001303437.1 NP_001290366.1 Accepted alive Link to Nucleotide Sequence:NM_001303437.1Link to Protein Sequence:NP_001290366.1Re-query CCDS DB by Nucleotide ID:NM_001303437Re-query CCDS DB by Protein ID:NP_001290366Link to BLAST:NP_001290366.1
Original member Current member NCBI NM_001303438.1 NP_001290367.1 Accepted alive Link to Nucleotide Sequence:NM_001303438.1Link to Protein Sequence:NP_001290367.1Re-query CCDS DB by Nucleotide ID:NM_001303438Re-query CCDS DB by Protein ID:NP_001290367Link to BLAST:NP_001290367.1
Original member Current member NCBI NM_001303439.1 NP_001290368.1 Accepted alive Link to Nucleotide Sequence:NM_001303439.1Link to Protein Sequence:NP_001290368.1Re-query CCDS DB by Nucleotide ID:NM_001303439Re-query CCDS DB by Protein ID:NP_001290368Link to BLAST:NP_001290368.1
Original member Current member NCBI NM_001303440.2 NP_001290369.1 Accepted alive Link to Nucleotide Sequence:NM_001303440.2Link to Protein Sequence:NP_001290369.1Re-query CCDS DB by Nucleotide ID:NM_001303440Re-query CCDS DB by Protein ID:NP_001290369Link to BLAST:NP_001290369.1
Original member Current member NCBI NM_001303441.2 NP_001290370.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001303441.2Link to Protein Sequence:NP_001290370.1Re-query CCDS DB by Nucleotide ID:NM_001303441Re-query CCDS DB by Protein ID:NP_001290370Link to BLAST:NP_001290370.1
Original member Current member NCBI NM_001303442.2 NP_001290371.1 Accepted alive Link to Nucleotide Sequence:NM_001303442.2Link to Protein Sequence:NP_001290371.1Re-query CCDS DB by Nucleotide ID:NM_001303442Re-query CCDS DB by Protein ID:NP_001290371Link to BLAST:NP_001290371.1
Original member Current member NCBI NM_001303443.2 NP_001290372.1 Accepted alive Link to Nucleotide Sequence:NM_001303443.2Link to Protein Sequence:NP_001290372.1Re-query CCDS DB by Nucleotide ID:NM_001303443Re-query CCDS DB by Protein ID:NP_001290372Link to BLAST:NP_001290372.1
Original member Current member NCBI NM_001303444.2 NP_001290373.1 Accepted alive Link to Nucleotide Sequence:NM_001303444.2Link to Protein Sequence:NP_001290373.1Re-query CCDS DB by Nucleotide ID:NM_001303444Re-query CCDS DB by Protein ID:NP_001290373Link to BLAST:NP_001290373.1
Original member Current member NCBI NM_144608.2 NP_653209.1 Accepted alive Link to Nucleotide Sequence:NM_144608.2Link to Protein Sequence:NP_653209.1Re-query CCDS DB by Nucleotide ID:NM_144608Re-query CCDS DB by Protein ID:NP_653209Link to BLAST:NP_653209.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290366.1 286 Q96MH2 286 100% 0 0
NP_001290367.1 286 Q96MH2 286 100% 0 0
NP_001290368.1 286 Q96MH2 286 100% 0 0
NP_001290369.1 286 Q96MH2 286 100% 0 0
NP_001290370.1 286 Q96MH2 286 100% 0 0
NP_001290371.1 286 Q96MH2 286 100% 0 0
NP_001290372.1 286 Q96MH2 286 100% 0 0
NP_001290373.1 286 Q96MH2 286 100% 0 0
NP_653209.1 286 Q96MH2 286 100% 0 0

Chromosomal Locations for CCDS 11496.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45162794 45162859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45169015 45169809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (861 nt):
ATGATGGCCACTCCGAACCAGACCGCCTGTAATGCAGAGTCACCAGTGGCCCTGGAGGAGGCCAAGACCT
CTGGTGCCCCGGGGAGCCCCCAAACACCCCCTGAGCGTCATGACTCTGGTGGTTCCCTGCCCCTGACACC
GCGGATGGAGAGCCACTCAGAGGATGAAGATCTTGCTGGGGCTGTCGGTGGCCTGGGCTGGAACAGTAGG
AGTCCCCGGACCCAGAGCCCAGGGGGCTGCTCAGCGGAGGCTGTGCTGGCCCGGAAGAAACACCGTCGGC
GGCCATCGAAGCGCAAAAGGCACTGGCGACCCTACCTGGAGCTGAGCTGGGCTGAGAAACAACAGCGGGA
TGAGAGGCAGAGCCAGAGGGCCTCCCGGGTCCGCGAAGAGATGTTCGCCAAAGGCCAGCCCGTGGCCCCC
TACAACACCACCCAGTTCCTGATGAATGACAGGGACCCGGAGGAGCCCAACTTGGATGTGCCCCATGGGA
TCTCCCACCCAGGTTCCAGTGGGGAGAGTGAGGCCGGGGACAGTGATGGGCGGGGCCGAGCGCACGGTGA
GTTCCAGCGGAAGGACTTCTCTGAGACTTACGAACGCTTCCACACCGAGAGCCTGCAGGGCCGCAGCAAG
CAGGAGCTGGTGCGAGACTACCTGGAGCTGGAGAAGCGGCTGTCGCAGGCGGAGGAGGAGACTAGGAGGC
TGCAGCAGCTGCAGGCGTGCACCGGCCAGCAGTCCTGCCGCCAGGTGGAGGAGCTGGCTGCCGAGGTCCA
GAGGCTCCGGACCGAAAACCAGCGGCTTCGTCAGGAGAACCAGATGTGGAACCGAGAGGGCTGCCGCTGT
GATGAGGAGCCGGGTACCTAG

Translation (286 aa):
MMATPNQTACNAESPVALEEAKTSGAPGSPQTPPERHDSGGSLPLTPRMESHSEDEDLAGAVGGLGWNSR
SPRTQSPGGCSAEAVLARKKHRRRPSKRKRHWRPYLELSWAEKQQRDERQSQRASRVREEMFAKGQPVAP
YNTTQFLMNDRDPEEPNLDVPHGISHPGSSGESEAGDSDGRGRAHGEFQRKDFSETYERFHTESLQGRSK
QELVRDYLELEKRLSQAEEETRRLQQLQACTGQQSCRQVEELAAEVQRLRTENQRLRQENQMWNREGCRC
DEEPGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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