NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS76772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76772.1 Public Homo sapiens 15 IQCH 24 110 108 CCDS HistoryNCBI Gene:64799Re-query CCDS DB by CCDS ID:76772.1Re-query CCDS DB by GeneID:64799See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 76772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000629425.2 ENSP00000486970.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000629425.2Link to Ensembl Protein Viewer:ENSP00000486970.1Re-query CCDS DB by Nucleotide ID:ENST00000629425Re-query CCDS DB by Protein ID:ENSP00000486970
Original member Current member NCBI NM_001284349.2 NP_001271278.1 Accepted alive Link to Nucleotide Sequence:NM_001284349.2Link to Protein Sequence:NP_001271278.1Re-query CCDS DB by Nucleotide ID:NM_001284349Re-query CCDS DB by Protein ID:NP_001271278Link to BLAST:NP_001271278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271278.1 305 Q86VS3-3 305 100% 0 0

Chromosomal Locations for CCDS 76772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 67344074 67344191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67357345 67357421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67359847 67359885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67372111 67372662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 67373367 67373498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGATAGAACGAGGGCTGATTCCACCAACAGCAAGGATTACCTTTCAGAATCCACCCATTACACCCAGAG
CAGCTCCTCTGCATAGTTTTGATGAAGCACGTAAGATTCCAACTGTAGCCACTTTCACTATACCTCGGGA
ACCACCTCCATCTCCAGCAGAAGTGAAGTTCTTTCCCAAGAAACAAAGATCAAAGGGGAAAAGCAGAAGG
TCAAGAGGACATCATGATAGGAAGGCCATGAAAGTCAAAACACCTTTGAGAGCCCTGAAATCACTGTGGG
ATTATGACTTTTTAATTTATGATGGTGTCATAGACAATACAGCCCCAGACTTCTTAGCATTCAAGGAACA
TTTTAGCTTAGCTTGGGGAGGTATTTTTTCTCTCTTGGAACACGTCGAGAAGTTTCTCAGGAACTATGCT
ATACCAGAAGTCAAAATAAAAGGGAATAATTTGGTGGCCCTCCTTCCAGAGTTTGAGCTGACGAATAAAC
TTACCAGATATGACCTTCTCTCAGTGTTAGAGGACCCAGCTCATGTCCAAATGCTGATAAATCTTCCAGG
GCAAAGGTACAAGGGCCAAGATGGAAATTCGGAGGCCGCCATGAAGATCCAAGCCACATGGAAATGCTAC
AAAGCAAGAAAATTCTTCCTCTTTTATCGCCAGCAGAAGTGGGCATCAGGTGTGATTGCCATTGCTTGGC
TGTTATATTGCCATAAGACTCGACTAAAGAAGATACTAAAGGAATCACGTCAGAGACACCTGGAGAATTT
TCGCATTCGAGCCAAGCATCTGGCAGCCAACTGGAATCGCATCAGGACCTCCAGGAGGACTATTATCCAT
ATCCCATCATTAGGTATAACACTTTTGCCTGCAAATCTATCAGCAACCTCTATTACCCACCACATTATGG
CTCCTTGA

Translation (305 aa):
MIERGLIPPTARITFQNPPITPRAAPLHSFDEARKIPTVATFTIPREPPPSPAEVKFFPKKQRSKGKSRR
SRGHHDRKAMKVKTPLRALKSLWDYDFLIYDGVIDNTAPDFLAFKEHFSLAWGGIFSLLEHVEKFLRNYA
IPEVKIKGNNLVALLPEFELTNKLTRYDLLSVLEDPAHVQMLINLPGQRYKGQDGNSEAAMKIQATWKCY
KARKFFLFYRQQKWASGVIAIAWLLYCHKTRLKKILKESRQRHLENFRIRAKHLAANWNRIRTSRRTIIH
IPSLGITLLPANLSATSITHHIMAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH