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Report for CCDS45182.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45182.1 Public Homo sapiens 14 TEDC1 24 110 108 CCDS HistoryNCBI Gene:283643Re-query CCDS DB by CCDS ID:45182.1Re-query CCDS DB by GeneID:283643See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45182.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354560.10 ENSP00000346568.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354560.10Link to Ensembl Protein Viewer:ENSP00000346568.6Re-query CCDS DB by Nucleotide ID:ENST00000354560Re-query CCDS DB by Protein ID:ENSP00000346568
Original member Current member NCBI NM_001134876.2 NP_001128348.1 Accepted alive Link to Nucleotide Sequence:NM_001134876.2Link to Protein Sequence:NP_001128348.1Re-query CCDS DB by Nucleotide ID:NM_001134876Re-query CCDS DB by Protein ID:NP_001128348Link to BLAST:NP_001128348.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128348.1 393 Q86SX3-2 393 100% 0 0

Chromosomal Locations for CCDS 45182.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 105491376 105491522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105491622 105491700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105492107 105492309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105492579 105492734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105497357 105497443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105497798 105497977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105498617 105498946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGGGGAGGCGGCGGCAGCGGGTGGACCCCGCGGCTGGGGCCCGGGCCGGGGCCCTGCCTGAGGCCATCG
CCGCGTTGAGTCGGTCGCTGCCCTCGGGACCCAGCCCCGAGATCTTCCGCCGCGCCAAGTTCGACCGTCC
GGAGGCGACCTCCGCGCTCTGGCAGCTCCTCTTCCGTGTGCTCTCGCCACTCCCTGCGGGCAACGCCTTG
GCATCGCTCGCCCTGGAGGTCCAAGCCCGCTTGGTGAAGTCAGCACTATGCTCCCAGGGCTACCCGAGGC
TGGCACTGGCACAACTACCTGAGGATGGCTCGCAGGGCAGTCGGGAGCTGCTGCTGGCTCTGTCCTGGCT
CTTGGCCCGAGGACCTGTGCCCGAGCAGATGCTGGCCCAGGCCCGAGTGCCTCTGGGTGACGAGATGACT
GTGTGCCAGTGTGAGGCCCTGGCCAGCCCTGGCCCACCTGCACCCCACATGGAAGCAGAGGGTCCTGTGG
ATGTCCGCCATGTGCAGTGGCTGATGGGAAAGCTGCGGTTCCGGTGGCGCCAGCTGGTGTCCAGTCAGCA
GGAGCAGTGCGCCCTCCTGAGCAAGCTGCTGCGGACTCTGGAGCGTGAGAACCAGCGCCTGGAGGCTGTC
CTGGCGTGGCGGCGCTCTGAGCTGGTCTTCTGGCGGTGGATGGACACGGTCCTGGGCACCTGTGCCCCGG
AGGTGCCTGCTGCAGCCTCACAGCCCACCTTCCTGCCCTGGGTCCCCGAGCGCGGGGGTGGCGAGTTGGA
CCTGGTAGTGCGGGAGCTGCAGGCACTGGAGGAGGAGCTGCGGGAGGCTGCGGAGCGCAGGCGGGCGGCC
TGGGAGGCCAAGGCTGGAGGCTGTGGACGGGGGCCAGAGTGGAGTGCCGCGCGGCGGGCCTCTCGGGAGG
CTGTGGAAAAGGAGCTGGGAGCTCTACAGCAGTGCTGGGAGCGAGACGGTGGCCCGGCCCAGCCCCATGG
GCCACACCGGCTGGTGAGACGAGAGGATGGGGCAGCAGGGGACCGGGACCTGCGGGCAGCTGTGGTGATC
AGGACGCTGAGGAGCCAGGAGGCCTGCCTGGAGGCGGTGCTACGTCGACTACAGGGACAGTGTCGGCAGG
AACTGGCCAGGCTGGTGGGAGCCCGCCCTGGTCTCATCTGGATCCCGCCACCTGGACGCTGA

Translation (393 aa):
MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRVLSPLPAGNAL
ASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMT
VCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAV
LAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAA
WEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVI
RTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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