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Report for CCDS74573.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74573.1 Public Homo sapiens 2 CFC1 24 110 108 CCDS HistoryNCBI Gene:55997Re-query CCDS DB by CCDS ID:74573.1Re-query CCDS DB by GeneID:55997See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74573.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621673.4 ENSP00000480843.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621673.4Link to Ensembl Protein Viewer:ENSP00000480843.1Re-query CCDS DB by Nucleotide ID:ENST00000621673Re-query CCDS DB by Protein ID:ENSP00000480843
Original member Current member NCBI NM_001270421.2 NP_001257350.1 Accepted alive Link to Nucleotide Sequence:NM_001270421.2Link to Protein Sequence:NP_001257350.1Re-query CCDS DB by Nucleotide ID:NM_001270421Re-query CCDS DB by Protein ID:NP_001257350Link to BLAST:NP_001257350.1

Chromosomal Locations for CCDS 74573.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 130592877 130593076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130598642 130598815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130598910 130598959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130599265 130599287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGACCTGGAGGCACCATGTCAGGCTTCTGTTTACGGTCAGTTTGGCATTACAGATCATCAATTTGGGAA
ACAGCTATCAAAGAGAGAAACATAACGGCGGTAGAGAGGAAGTCACCAAGGTTGCCACTCAGAAGCACCG
ACAGTCACCGCTCAACTGGACCTCCAGTCATTTCGGAGAGGTGACTGGGAGCGCCGAGGGCTGGGGGCCG
GAGGAGCCGCTCCCCTACTCCCGGGCTTTCGGAGAGGACCCGAAAGACTTCCTGGCCTCCCACGCTCACG
GGCCGAGCGCCGGGGGCGCGCCCAGCCTGCTACTCTTGCTGCCCTGCGCACTCCTGCACCGCCTCCTGCG
CCCGGATGCGCCCGCGCACCCTCGGTCCCTGGTCCCTTCCGTCCTCCAGCGGGAGCGGCGCCCCTGCGGA
AGGCCGGGACTTGGGCATCGCCTTTAA

Translation (148 aa):
MTWRHHVRLLFTVSLALQIINLGNSYQREKHNGGREEVTKVATQKHRQSPLNWTSSHFGEVTGSAEGWGP
EEPLPYSRAFGEDPKDFLASHAHGPSAGGAPSLLLLLPCALLHRLLRPDAPAHPRSLVPSVLQRERRPCG
RPGLGHRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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