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Report for CCDS74488.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74488.1 Public Homo sapiens 2 LDAH 24 110 108 CCDS HistoryNCBI Gene:60526Re-query CCDS DB by CCDS ID:74488.1Re-query CCDS DB by GeneID:60526See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74488.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435420.6 ENSP00000388635.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435420.6Link to Ensembl Protein Viewer:ENSP00000388635.3Re-query CCDS DB by Nucleotide ID:ENST00000435420Re-query CCDS DB by Protein ID:ENSP00000388635
Original member Current member NCBI NM_001282719.2 NP_001269648.1 Accepted alive Link to Nucleotide Sequence:NM_001282719.2Link to Protein Sequence:NP_001269648.1Re-query CCDS DB by Nucleotide ID:NM_001282719Re-query CCDS DB by Protein ID:NP_001269648Link to BLAST:NP_001269648.1

Chromosomal Locations for CCDS 74488.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 20686903 20687094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20701570 20701652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20739971 20740205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20774810 20774979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20801292 20801463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGGACTCAGAACTCAAGGAAGAAATTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAGCCGAAACCC
AGGTTCTAAAATGTGGGCCCTGGACAGACCTCTTTCATGATCAAAGTGTCAAAAGGCCTAAGCTGCTTAT
TTTCATTATTCCTGGTGAGCGTAAAAGTCTGGATTCAAACGCTCAAGAAATTAAGGACATTTATGGACTA
AATGGACAAATAGAGCACAAACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACATGAAACTTGTGCTCA
TTGGCCATTCAATAGGCAGCTATTTCACACTTCAGATGCTGAAGCGAGTCCCTGAGCTCCCGGTAATTCG
TGCCTTTCTGCTCTTTCCAACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTT
TTGTGCTGGTTTCGATATGTTCTCTATGTTACTGGCTACTTATTATTGAAACCGTGTCCTGAGACAATCA
AGTCCTTGCTAATCAGAAGGGGCCTTCAAGTAATGAACCTAGAGAATGAATTTTCACCATTGAATATATT
AGAACCATTCTGCCTTGCTAATGCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTGGTGAAGAGAGAT
GACGAAACCATAAAGGAGCATTTATGTAAGCTTACATTTTATTATGGTACTATAGATCCTTGGTGTCCAA
AAGAGTACTATGAAGACATTAAGAAGGATTTTCCAGAAGGAGACATTCGACTCTGTGAGAAAAACATACC
TCATGCTTTCATCACCCATTTTAACCAGGAAATGGCAGACATGATTGCTGACTCCCTAAAGGATGACTTG
TCCAAAATGTAA

Translation (283 aa):
MDSELKEEIPVHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPKLLIFIIPGERKSLDSNAQEIKDIYGL
NGQIEHKLAFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIATPL
LCWFRYVLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPLNILEPFCLANAAYLGGQEMMEVVKRD
DETIKEHLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPHAFITHFNQEMADMIADSLKDDL
SKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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