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Report for CCDS2371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2371.1 Public Homo sapiens 2 FASTKD2 24 110 108 CCDS HistoryNCBI Gene:22868Re-query CCDS DB by CCDS ID:2371.1Re-query CCDS DB by GeneID:22868See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2371.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000236980.10 ENSP00000236980.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000236980.10Link to Ensembl Protein Viewer:ENSP00000236980.6Re-query CCDS DB by Nucleotide ID:ENST00000236980Re-query CCDS DB by Protein ID:ENSP00000236980
Original member Current member EBI ENST00000403094.3 ENSP00000384929.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403094.3Link to Ensembl Protein Viewer:ENSP00000384929.3Re-query CCDS DB by Nucleotide ID:ENST00000403094Re-query CCDS DB by Protein ID:ENSP00000384929
Original member Current member EBI ENST00000402774.8 ENSP00000385990.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402774.8Link to Ensembl Protein Viewer:ENSP00000385990.3Re-query CCDS DB by Nucleotide ID:ENST00000402774Re-query CCDS DB by Protein ID:ENSP00000385990
Original member Current member NCBI NM_001136193.2 NP_001129665.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136193.2Link to Protein Sequence:NP_001129665.1Re-query CCDS DB by Nucleotide ID:NM_001136193Re-query CCDS DB by Protein ID:NP_001129665Link to BLAST:NP_001129665.1
Original member Current member NCBI NM_001136194.2 NP_001129666.1 Accepted alive Link to Nucleotide Sequence:NM_001136194.2Link to Protein Sequence:NP_001129666.1Re-query CCDS DB by Nucleotide ID:NM_001136194Re-query CCDS DB by Protein ID:NP_001129666Link to BLAST:NP_001129666.1
Original member Current member NCBI NM_014929.4 NP_055744.2 Accepted alive Link to Nucleotide Sequence:NM_014929.4Link to Protein Sequence:NP_055744.2Re-query CCDS DB by Nucleotide ID:NM_014929Re-query CCDS DB by Protein ID:NP_055744Link to BLAST:NP_055744.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129665.1 710 Q9NYY8-1 710 100% 0 0
NP_001129666.1 710 Q9NYY8-1 710 100% 0 0
NP_055744.2 710 Q9NYY8-1 710 100% 0 0

Chromosomal Locations for CCDS 2371.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 206766694 206767470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206770091 206770194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206771182 206771290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206771894 206772017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206772181 206772320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206774225 206774397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206786733 206786899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206787937 206788155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206788819 206788903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206790572 206790686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206791683 206791802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2133 nt):
ATGTTGACAACTTTGAAGCCATTTGGAAGTGTTTCAGTGGAGAGCAAAATGAATAACAAAGCGGGCTCCT
TTTTCTGGAACCTTAGACAATTCAGTACATTAGTTTCAACAAGCAGAACTATGAGGCTATGTTGTTTGGG
ACTTTGCAAACCAAAAATAGTTCATTCAAACTGGAACATTTTAAATAACTTTCATAACAGAATGCAATCA
ACTGATATCATTAGATATCTCTTTCAGGATGCATTCATTTTTAAATCAGATGTTGGCTTTCAAACAAAGG
GCATAAGCACTCTAACAGCCCTTAGAATTGAAAGACTACTTTATGCTAAAAGACTGTTTTTTGACTCAAA
GCAGTCTCTTGTCCCTGTTGATAAATCTGATGATGAATTGAAGAAAGTAAACCTTAATCATGAAGTCTCC
AATGAAGATGTTCTTACCAAGGAAACAAAACCAAACCGTATCAGCAGTAGAAAACTGTCTGAGGAATGTA
ATTCCCTGAGTGATGTGTTAGATGCATTTTCAAAAGCGCCCACATTTCCTAGTAGCAACTATTTCACAGC
AATGTGGACAATTGCCAAAAGACTGTCTGATGACCAGAAGCGCTTTGAAAAACGACTGATGTTTAGCCAC
CCTGCATTTAATCAGCTCTGTGAACATATGATGAGAGAAGCCAAGATCATGCAGTATAAGTACCTACTGT
TCAGTCTTCACGCCATAGTGAAGCTTGGAATCCCTCAGAACACTATTTTGGTGCAGACTTTGCTGAGGGT
GACCCAGGAACGTATCAATGAGTGTGATGAGATATGCCTTTCAGTTTTGTCAACTGTTTTAGAGGCAATG
GAACCATGCAAGAATGTTCATGTTCTACGAACGGGATTCAGAATACTAGTTGATCAGCAAGTTTGGAAAA
TAGAAGATGTCTTCACATTACAAGTTGTGATGAAGTGTATTGGAAAAGATGCACCGATTGCTCTTAAGAG
GAAACTGGAGATGAAAGCCTTGAGGGAATTAGACAGATTTTCTGTTTTGAATAGCCAACACATGTTTGAA
GTACTAGCTGCCATGAATCACCGATCTCTTATACTCCTGGATGAATGCAGTAAGGTGGTCCTAGATAATA
TCCATGGGTGTCCTTTAAGAATAATGATCAACATATTGCAGTCCTGCAAAGACCTCCAGTACCATAATTT
GGATCTCTTCAAGGGACTTGCAGATTATGTGGCTGCAACTTTCGACATCTGGAAGTTCAGAAAAGTTCTT
TTTATCCTCATTTTATTTGAAAACCTTGGCTTTCGACCTGTTGGTTTAATGGACCTGTTTATGAAGAGAA
TAGTAGAGGATCCTGAATCCCTAAACATGAAAAACATTCTATCTATTCTTCATACTTACTCTTCTCTCAA
TCATGTCTACAAATGCCAGAACAAAGAACAGTTCGTGGAAGTTATGGCTAGTGCTCTGACTGGTTATCTT
CACACTATTTCTTCTGAAAACTTATTGGATGCAGTATATTCATTTTGCTTGATGAATTACTTTCCCCTGG
CTCCTTTTAATCAGCTTCTGCAAAAAGACATCATCAGTGAGCTGCTGACATCAGATGACATGAAGAATGC
TTACAAGCTGCATACTTTGGATACTTGTCTAAAACTTGATGATACTGTCTATCTGAGGGACATAGCCTTG
TCACTCCCACAGCTGCCGCGGGAGCTGCCATCGTCACATACAAATGCAAAGGTGGCAGAGGTGCTGAGCA
GCCTTCTGGGAGGTGAAGGACACTTCTCAAAGGATGTGCACTTGCCACACAATTATCATATTGATTTTGA
AATCAGAATGGACACTAACAGGAATCAAGTGCTACCACTTTCTGATGTGGATACAACTTCTGCTACAGAT
ATTCAAAGAGTAGCTGTGCTATGTGTTTCCAGATCTGCTTATTGTTTGGGTTCAAGCCACCCCAGAGGAT
TCCTTGCTATGAAAATGCGGCATTTGAATGCAATGGGTTTTCATGTGATCTTGGTCAATAACTGGGAGAT
GGACAAACTAGAGATGGAAGATGCAGTCACATTTTTGAAGACTAAAATCTATTCAGTAGAAGCTCTTCCT
GTTGCTGCTGTAAATGTGCAAAGCACACAATAA

Translation (710 aa):
MLTTLKPFGSVSVESKMNNKAGSFFWNLRQFSTLVSTSRTMRLCCLGLCKPKIVHSNWNILNNFHNRMQS
TDIIRYLFQDAFIFKSDVGFQTKGISTLTALRIERLLYAKRLFFDSKQSLVPVDKSDDELKKVNLNHEVS
NEDVLTKETKPNRISSRKLSEECNSLSDVLDAFSKAPTFPSSNYFTAMWTIAKRLSDDQKRFEKRLMFSH
PAFNQLCEHMMREAKIMQYKYLLFSLHAIVKLGIPQNTILVQTLLRVTQERINECDEICLSVLSTVLEAM
EPCKNVHVLRTGFRILVDQQVWKIEDVFTLQVVMKCIGKDAPIALKRKLEMKALRELDRFSVLNSQHMFE
VLAAMNHRSLILLDECSKVVLDNIHGCPLRIMINILQSCKDLQYHNLDLFKGLADYVAATFDIWKFRKVL
FILILFENLGFRPVGLMDLFMKRIVEDPESLNMKNILSILHTYSSLNHVYKCQNKEQFVEVMASALTGYL
HTISSENLLDAVYSFCLMNYFPLAPFNQLLQKDIISELLTSDDMKNAYKLHTLDTCLKLDDTVYLRDIAL
SLPQLPRELPSSHTNAKVAEVLSSLLGGEGHFSKDVHLPHNYHIDFEIRMDTNRNQVLPLSDVDTTSATD
IQRVAVLCVSRSAYCLGSSHPRGFLAMKMRHLNAMGFHVILVNNWEMDKLEMEDAVTFLKTKIYSVEALP
VAAVNVQSTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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