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Report for CCDS6629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6629.1 Public Homo sapiens 9 ENTREP1 24 110 108 CCDS HistoryNCBI Gene:9413Re-query CCDS DB by CCDS ID:6629.1Re-query CCDS DB by GeneID:9413See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6629.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257515.12 ENSP00000257515.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000257515.12Link to Ensembl Protein Viewer:ENSP00000257515.8Re-query CCDS DB by Nucleotide ID:ENST00000257515Re-query CCDS DB by Protein ID:ENSP00000257515
Original member Current member EBI ENST00000455972.6 ENSP00000395675.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455972.6Link to Ensembl Protein Viewer:ENSP00000395675.1Re-query CCDS DB by Nucleotide ID:ENST00000455972Re-query CCDS DB by Protein ID:ENSP00000395675
Original member Current member NCBI NM_001127608.3 NP_001121080.1 Accepted alive Link to Nucleotide Sequence:NM_001127608.3Link to Protein Sequence:NP_001121080.1Re-query CCDS DB by Nucleotide ID:NM_001127608Re-query CCDS DB by Protein ID:NP_001121080Link to BLAST:NP_001121080.1
Original member Current member NCBI NM_004816.5 NP_004807.3 Accepted alive Link to Nucleotide Sequence:NM_004816.5Link to Protein Sequence:NP_004807.3Re-query CCDS DB by Nucleotide ID:NM_004816Re-query CCDS DB by Protein ID:NP_004807Link to BLAST:NP_004807.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121080.1 450 Q15884-3 450 100% 0 0
NP_004807.3 450 Q15884-3 450 100% 0 0

Chromosomal Locations for CCDS 6629.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 69336258 69336269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69371499 69371609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69375736 69375864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69377370 69377477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69377611 69377744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69383630 69383759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69383947 69384025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69385795 69385947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69388158 69388450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69391601 69391804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGATACTCCTGGTAAACCTCTTTGTGCTGCTCTCTGTGGTTTGTGTCCTCTTAAATCTAGCTGGATTTA
TCCTAGGCTGCCAAGGGGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAAGG
CAAGATTTGCTTCTGTTGTGAAGAATTTCAACCAGCCAAGTGCACAGACAAAGAAAATGCCTTGAAACTC
TTTCCGGTTCAGCCCTGTAGTGCTGTTCACCTTCTACTTAAGAAAGTCCTCTTTGCCCTGTGTGCCTTGA
ATGCCCTGACCACCACCGTCTGCTTGGTGGCCGCTGCCCTCCGCTACCTCCAGATATTCGCAACCAGGAG
ATCCTGCATCGATGAATCCCAGATTTCTGCTGAAGAAGCGGAGGATCATGGACGCATCCCCGACCCTGAT
GATTTTGTGCCGCCTGTGCCTCCCCCTTCCTATTTTGCCACGTTTTACTCGTGCACACCCCGGATGAACC
GCAGGATGGTTGGTCCTGATGTTATTCCCCTGCCACACATCTACGGAGCTCGAATCAAAGGTGTGGAAGT
GTTCTGTCCTCTGGATCCCCCGCCGCCATATGAAGCTGTGGTGAGCCAGATGGACCAGGAGCAGGGATCT
TCATTCCAAATGTCAGAAGGATCAGAAGCTGCTGTGATCCCATTGGATCTGGGCTGCACACAAGTGACTC
AAGATGGGGACATTCCTAACATACCTGCCGAAGAAAATGCATCCACCTCAACTCCCAGTTCAACCCTGGT
GCGTCCTATCAGAAGCCGGAGAGCCCTCCCACCCTTGAGGACCAGGTCGAAGAGTGACCCTGTGCTCCAT
CCTTCTGAGGAGAGAGCTGCCCCAGTGCTCAGCTGTGAAGCTGCAACACAGACTGAAAGGAGACTGGATC
TGGCTGCAGTGACTCTGAGGAGAGGCTTGAGATCTAGAGCTTCGCGATGCAGACCGCGGTCTTTGATAGA
TTACAAATCCTACATGGACACCAAGCTGCTGGTGGCGAGGTTCCTGGAGCAGTCCTCTTGTACCATGACC
CCAGACATCCATGAACTTGTAGAAAACATTAAATCTGTTTTGAAATCTGATGAGGAGCACATGGAGGAAG
CCATCACAAGTGCCAGTTTTCTAGAACAGATAATGGCCCCATTGCAGCCCAGCACATCCAGGGCCCACAA
GCTGCCCTCGCGGAGACAGCCTGGCCTGCTGCACCTCCAGAGCTGCGGCGACCTTCACACCTTCACACCA
GCGGGGAGGCCCCGAGCCGAGAGGAGGCCCCGGCGAGTGGAGGCTGAGCGGCCACACAGCCTCATTGGGG
TCATCCGAGAGACTGTCCTGTGA

Translation (450 aa):
MILLVNLFVLLSVVCVLLNLAGFILGCQGAQFVSSVPRCDLVDLGEGKICFCCEEFQPAKCTDKENALKL
FPVQPCSAVHLLLKKVLFALCALNALTTTVCLVAAALRYLQIFATRRSCIDESQISAEEAEDHGRIPDPD
DFVPPVPPPSYFATFYSCTPRMNRRMVGPDVIPLPHIYGARIKGVEVFCPLDPPPPYEAVVSQMDQEQGS
SFQMSEGSEAAVIPLDLGCTQVTQDGDIPNIPAEENASTSTPSSTLVRPIRSRRALPPLRTRSKSDPVLH
PSEERAAPVLSCEAATQTERRLDLAAVTLRRGLRSRASRCRPRSLIDYKSYMDTKLLVARFLEQSSCTMT
PDIHELVENIKSVLKSDEEHMEEAITSASFLEQIMAPLQPSTSRAHKLPSRRQPGLLHLQSCGDLHTFTP
AGRPRAERRPRRVEAERPHSLIGVIRETVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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