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Report for CCDS7808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7808.1 Public Homo sapiens 11 DKK3 24 110 108 CCDS HistoryNCBI Gene:27122Re-query CCDS DB by CCDS ID:7808.1Re-query CCDS DB by GeneID:27122See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7808.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326932.8 ENSP00000314910.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000326932.8Link to Ensembl Protein Viewer:ENSP00000314910.4Re-query CCDS DB by Nucleotide ID:ENST00000326932Re-query CCDS DB by Protein ID:ENSP00000314910
Original member Current member EBI ENST00000396505.7 ENSP00000379762.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396505.7Link to Ensembl Protein Viewer:ENSP00000379762.2Re-query CCDS DB by Nucleotide ID:ENST00000396505Re-query CCDS DB by Protein ID:ENSP00000379762
Original member Current member EBI ENST00000683431.1 ENSP00000506835.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683431.1Link to Ensembl Protein Viewer:ENSP00000506835.1Re-query CCDS DB by Nucleotide ID:ENST00000683431Re-query CCDS DB by Protein ID:ENSP00000506835
Original member Current member NCBI NM_001018057.2 NP_001018067.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001018057.2Link to Protein Sequence:NP_001018067.1Re-query CCDS DB by Nucleotide ID:NM_001018057Re-query CCDS DB by Protein ID:NP_001018067Link to BLAST:NP_001018067.1
Original member Current member NCBI NM_013253.5 NP_037385.2 Accepted alive Link to Nucleotide Sequence:NM_013253.5Link to Protein Sequence:NP_037385.2Re-query CCDS DB by Nucleotide ID:NM_013253Re-query CCDS DB by Protein ID:NP_037385Link to BLAST:NP_037385.2
Original member Current member NCBI NM_015881.6 NP_056965.3 Accepted alive Link to Nucleotide Sequence:NM_015881.6Link to Protein Sequence:NP_056965.3Re-query CCDS DB by Nucleotide ID:NM_015881Re-query CCDS DB by Protein ID:NP_056965Link to BLAST:NP_056965.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018067.1 350 Q9UBP4 350 100% 0 0
NP_037385.2 350 Q9UBP4 350 100% 0 0
NP_056965.3 350 Q9UBP4 350 100% 0 0

Chromosomal Locations for CCDS 7808.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 11964464 11964686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11965809 11965965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11966954 11967098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11968395 11968487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11998696 11998779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12002300 12002437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12008370 12008582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGCAGCGGCTTGGGGCCACCCTGCTGTGCCTGCTGCTGGCGGCGGCGGTCCCCACGGCCCCCGCGCCCG
CTCCGACGGCGACCTCGGCTCCAGTCAAGCCCGGCCCGGCTCTCAGCTACCCGCAGGAGGAGGCCACCCT
CAATGAGATGTTCCGCGAGGTTGAGGAACTGATGGAGGACACGCAGCACAAATTGCGCAGCGCGGTGGAA
GAGATGGAGGCAGAAGAAGCTGCTGCTAAAGCATCATCAGAAGTGAACCTGGCAAACTTACCTCCCAGCT
ATCACAATGAGACCAACACAGACACGAAGGTTGGAAATAATACCATCCATGTGCACCGAGAAATTCACAA
GATAACCAACAACCAGACTGGACAAATGGTCTTTTCAGAGACAGTTATCACATCTGTGGGAGACGAAGAA
GGCAGAAGGAGCCACGAGTGCATCATCGACGAGGACTGTGGGCCCAGCATGTACTGCCAGTTTGCCAGCT
TCCAGTACACCTGCCAGCCATGCCGGGGCCAGAGGATGCTCTGCACCCGGGACAGTGAGTGCTGTGGAGA
CCAGCTGTGTGTCTGGGGTCACTGCACCAAAATGGCCACCAGGGGCAGCAATGGGACCATCTGTGACAAC
CAGAGGGACTGCCAGCCGGGGCTGTGCTGTGCCTTCCAGAGAGGCCTGCTGTTCCCTGTGTGCACACCCC
TGCCCGTGGAGGGCGAGCTTTGCCATGACCCCGCCAGCCGGCTTCTGGACCTCATCACCTGGGAGCTAGA
GCCTGATGGAGCCTTGGACCGATGCCCTTGTGCCAGTGGCCTCCTCTGCCAGCCCCACAGCCACAGCCTG
GTGTATGTGTGCAAGCCGACCTTCGTGGGGAGCCGTGACCAAGATGGGGAGATCCTGCTGCCCAGAGAGG
TCCCCGATGAGTATGAAGTTGGCAGCTTCATGGAGGAGGTGCGCCAGGAGCTGGAGGACCTGGAGAGGAG
CCTGACTGAAGAGATGGCGCTGAGGGAGCCTGCGGCTGCCGCCGCTGCACTGCTGGGAGGGGAAGAGATT
TAG

Translation (350 aa):
MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMEDTQHKLRSAVE
EMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITNNQTGQMVFSETVITSVGDEE
GRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTRDSECCGDQLCVWGHCTKMATRGSNGTICDN
QRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSL
VYVCKPTFVGSRDQDGEILLPREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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