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Report for CCDS75393.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75393.1 Public Homo sapiens 6 NRN1 24 110 108 CCDS HistoryNCBI Gene:51299Re-query CCDS DB by CCDS ID:75393.1Re-query CCDS DB by GeneID:51299See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75393.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622188.4 ENSP00000480483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622188.4Link to Ensembl Protein Viewer:ENSP00000480483.1Re-query CCDS DB by Nucleotide ID:ENST00000622188Re-query CCDS DB by Protein ID:ENSP00000480483
Original member Current member NCBI NM_001278711.2 NP_001265640.1 Accepted alive Link to Nucleotide Sequence:NM_001278711.2Link to Protein Sequence:NP_001265640.1Re-query CCDS DB by Nucleotide ID:NM_001278711Re-query CCDS DB by Protein ID:NP_001265640Link to BLAST:NP_001265640.1

Chromosomal Locations for CCDS 75393.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 5998976 5999204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 6002353 6002497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 6003169 6003273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 6003703 6003730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGGCCACAGCCGCGCGCCCGCAGCCTGACCACTCATCATCCGCGCCAGGTCTCAGGACGTCCAGGCTGC
CCTCTTTCCAGCGGGGCGGGAGAGGGTGCATCCGAGGGTCTCACTCGGAATACAGAGTCCACGCGTATCT
GGTGCAGGCCGTGAGAGCAGCGGGCAAGTGCGATGCGGTCTTCAAGGGCTTTTCGGACTGTTTGCTCAAG
CTGGGCGACAGCATGGCCAACTACCCGCAGGGCCTGGACGACAAGACGAACATCAAGACCGTGTGCACAT
ACTGGGAGGATTTCCACAGCTGCACGGTCACAGCCCTTACGGATTGCCAGGAAGGGGCGAAAGATATGTG
GGATAAACTGAGAAAAGAATCCAAAAACCTCAACATCCAAGGCAGCTTATTCGAACTCTGCGGCAGCGGC
AACGGGGCGGCGGGGTCCCTGCTCCCGGCGTTCCCGGTGCTCCTGGTGTCTCTCTCGGCAGCTTTAGCGA
CCTGGCTTTCCTTCTGA

Translation (168 aa):
MATAARPQPDHSSSAPGLRTSRLPSFQRGGRGCIRGSHSEYRVHAYLVQAVRAAGKCDAVFKGFSDCLLK
LGDSMANYPQGLDDKTNIKTVCTYWEDFHSCTVTALTDCQEGAKDMWDKLRKESKNLNIQGSLFELCGSG
NGAAGSLLPAFPVLLVSLSAALATWLSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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