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Report for CCDS74822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74822.1 Public Homo sapiens 22 TANGO2 24 110 108 CCDS HistoryNCBI Gene:128989Re-query CCDS DB by CCDS ID:74822.1Re-query CCDS DB by GeneID:128989See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74822.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420290.6 ENSP00000396182.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420290.6Link to Ensembl Protein Viewer:ENSP00000396182.3Re-query CCDS DB by Nucleotide ID:ENST00000420290Re-query CCDS DB by Protein ID:ENSP00000396182
Original member Current member NCBI NM_001283248.3 NP_001270177.1 Accepted alive Link to Nucleotide Sequence:NM_001283248.3Link to Protein Sequence:NP_001270177.1Re-query CCDS DB by Nucleotide ID:NM_001283248Re-query CCDS DB by Protein ID:NP_001270177Link to BLAST:NP_001270177.1

Chromosomal Locations for CCDS 74822.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20036799 20036854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20043355 20043443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20052465 20052584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20063338 20063396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (324 nt):
ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAAAAACGCGTACAGGCTCATCTTGGCAG
CCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCT
CAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTG
GCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGCAGCTGCCAGACCC
GGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGA

Translation (107 aa):
MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGISTRGKL
AALTNYLQPQLDWQARGRGSCQTRPSRTRVGSTCSPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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