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Report for CCDS73328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73328.1 Public Homo sapiens 11 PELI3 24 110 108 CCDS HistoryNCBI Gene:246330Re-query CCDS DB by CCDS ID:73328.1Re-query CCDS DB by GeneID:246330See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73328.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618547.4 ENSP00000484220.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618547.4Link to Ensembl Protein Viewer:ENSP00000484220.1Re-query CCDS DB by Nucleotide ID:ENST00000618547Re-query CCDS DB by Protein ID:ENSP00000484220
Original member Current member NCBI NM_001243135.2 NP_001230064.1 Accepted alive Link to Nucleotide Sequence:NM_001243135.2Link to Protein Sequence:NP_001230064.1Re-query CCDS DB by Nucleotide ID:NM_001243135Re-query CCDS DB by Protein ID:NP_001230064Link to BLAST:NP_001230064.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230064.1 406 Q8N2H9-3 406 100% 0 0

Chromosomal Locations for CCDS 73328.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66468129 66468269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66471348 66471371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66472369 66472470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66473241 66473435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66473737 66473925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66475598 66476167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGGTGCTGGAAGGAAACCCTGAAGTGGGGTCCCCCCGAACCTCAGACCTCCAGCACCGGGGGAACAAGG
GCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACT
CATCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCC
CGGAGCCACTCGGTCATAGTGGAGTATACACATGATAGCGACACAGACATGTTCCAGATTGGCCGCTCCA
CAGAGAACATGATTGACTTCGTGGTAACAGACACGTCCCCTGGAGGAGGGGCTGCCGAGGGCCCTTCTGC
CCAGAGCACCATCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGCATC
TATGCCGCTGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG
ATGGCCTGATGGATGGACTGACCACCAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTTCTCCGAGGA
CTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTGGGAATGTGTACACATTGCGGGACAGCCGCTCA
GCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCATCGACCTGT
GTGGGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGC
CCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCCCCAGC
CCAGCCCGTGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCACGTCCATG
GCTACCACGGCTGGGGCTGCCGGCGGGAGCGGGGCCCCCAGGAGCGCGAATGTCCTCTCTGCCGCCTTGT
GGGGCCTTATGTGCCTCTATGGCTTGGCCAGGAGGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCAT
GCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAAGACTGCCCGCTACTGGGCCCAGACACCACTGCCCC
ACGGCACCCATGCTTTCCATGCCGCCTGCCCCTTTTGCGGGGCCTGGCTTACCGGCGAGCATGGCTGCGT
CCGCCTCATTTTCCAGGGCCCGCTGGATTAG

Translation (406 aa):
MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELISTPLVSKALSNRGQHSISYTLS
RSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARI
YAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTLRDSRS
AQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPS
PARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSH
AFAPCGHVCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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