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Report for CCDS61251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61251.1 Public Homo sapiens 12 WSB2 24 110 108 CCDS HistoryNCBI Gene:55884Re-query CCDS DB by CCDS ID:61251.1Re-query CCDS DB by GeneID:55884See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 61251.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544233.5 ENSP00000444431.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544233.5Link to Ensembl Protein Viewer:ENSP00000444431.1Re-query CCDS DB by Nucleotide ID:ENST00000544233Re-query CCDS DB by Protein ID:ENSP00000444431
Original member Current member NCBI NM_001278558.2 NP_001265487.1 Accepted alive Link to Nucleotide Sequence:NM_001278558.2Link to Protein Sequence:NP_001265487.1Re-query CCDS DB by Nucleotide ID:NM_001278558Re-query CCDS DB by Protein ID:NP_001265487Link to BLAST:NP_001265487.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265487.1 194 Q9NYS7-3 194 100% 0 0

Chromosomal Locations for CCDS 61251.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 118034196 118034358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 118034986 118035093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 118035214 118035324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 118036338 118036510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 118038288 118038317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGCTGTGCTCTGCAGCTGGAGAGAAGTCGGTCTTTCTATGGAGCATGAGGTCCTACACGTTAATTCGGA
AGCTAGAGGGCCATCAAAGCAGTGTTGTCTCTTGTGACTTCTCCCCCGACTCTGCCCTGCTTGTCACGGC
TTCTTACGATACCAATGTGATTATGTGGGACCCCTACACCGGCGAAAGGCTGAGGTCACTCCACCACACC
CAGGTTGACCCCGCCATGGATGACAGTGACGTCCACATTAGCTCACTGAGATCTGTGTGCTTCTCTCCAG
AAGGCTTGTACCTTGCCACGGTGGCAGATGACAGACTCCTCAGGATCTGGGCCCTGGAACTGAAAACTCC
CATTGCATTTGCTCCTATGACCAATGGGCTTTGCTGCACATTTTTTCCACATGGTGGAGTCATTGCCACA
GGGACAAGAGATGGCCACGTCCAGTTCTGGACAGCTCCTAGGGTCCTGTCCTCACTGAAGCACTTATGCC
GGAAAGCCCTTCGAAGTTTCCTAACAACTTACCAAGTCCTAGCACTGCCAATCCCCAAGAAAATGAAAGA
GTTCCTCACATACAGGACTTTTTAA

Translation (194 aa):
MLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHT
QVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFFPHGGVIAT
GTRDGHVQFWTAPRVLSSLKHLCRKALRSFLTTYQVLALPIPKKMKEFLTYRTF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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