NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14705.1 Public Homo sapiens X MAGEA10 24 110 108 CCDS HistoryNCBI Gene:4109Re-query CCDS DB by CCDS ID:14705.1Re-query CCDS DB by GeneID:4109See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14705.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244096.7 ENSP00000244096.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000244096.7Link to Ensembl Protein Viewer:ENSP00000244096.3Re-query CCDS DB by Nucleotide ID:ENST00000244096Re-query CCDS DB by Protein ID:ENSP00000244096
Original member Current member EBI ENST00000370323.9 ENSP00000359347.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370323.9Link to Ensembl Protein Viewer:ENSP00000359347.4Re-query CCDS DB by Nucleotide ID:ENST00000370323Re-query CCDS DB by Protein ID:ENSP00000359347
Original member Current member NCBI NM_001011543.3 NP_001011543.3 Accepted alive Link to Nucleotide Sequence:NM_001011543.3Link to Protein Sequence:NP_001011543.3Re-query CCDS DB by Nucleotide ID:NM_001011543Re-query CCDS DB by Protein ID:NP_001011543Link to BLAST:NP_001011543.3
Original member Current member NCBI NM_001251828.2 NP_001238757.2 Accepted alive Link to Nucleotide Sequence:NM_001251828.2Link to Protein Sequence:NP_001238757.2Re-query CCDS DB by Nucleotide ID:NM_001251828Re-query CCDS DB by Protein ID:NP_001238757Link to BLAST:NP_001238757.2
Original member Current member NCBI NM_021048.5 NP_066386.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021048.5Link to Protein Sequence:NP_066386.3Re-query CCDS DB by Nucleotide ID:NM_021048Re-query CCDS DB by Protein ID:NP_066386Link to BLAST:NP_066386.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011543.3 369 P43363 369 100% 0 0
NP_001238757.2 369 P43363 369 100% 0 0
NP_066386.3 369 P43363 369 100% 0 0

Chromosomal Locations for CCDS 14705.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152134511 152135620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGCCTCGAGCTCCAAAGCGTCAGCGCTGCATGCCTGAAGAAGATCTTCAATCCCAAAGTGAGACACAGG
GCCTCGAGGGTGCACAGGCTCCCCTGGCTGTGGAGGAGGATGCTTCATCATCCACTTCCACCAGCTCCTC
TTTTCCATCCTCTTTTCCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTGCTATCCTCTAATACCAAGCACC
CCAGAGGAGGTTTCTGCTGATGATGAGACACCAAATCCTCCCCAGAGTGCTCAGATAGCCTGCTCCTCCC
CCTCGGTCGTTGCTTCCCTTCCATTAGATCAATCTGATGAGGGCTCCAGCAGCCAAAAGGAGGAGAGTCC
AAGCACCCTACAGGTCCTGCCAGACAGTGAGTCTTTACCCAGAAGTGAGATAGATGAAAAGGTGACTGAT
TTGGTGCAGTTTCTGCTCTTCAAGTATCAAATGAAGGAGCCGATCACAAAGGCAGAAATACTGGAGAGTG
TCATAAGAAATTATGAAGACCACTTCCCTTTGTTGTTTAGTGAAGCCTCCGAGTGCATGCTGCTGGTCTT
TGGCATTGATGTAAAGGAAGTGGATCCCACTGGCCACTCCTTTGTCCTTGTCACCTCCCTGGGCCTCACC
TATGATGGGATGCTGAGTGATGTCCAGAGCATGCCCAAGACTGGCATTCTCATACTTATCCTAAGCATAG
TCTTCATAGAGGGCTACTGCACCCCTGAGGAGGTCATCTGGGAAGCACTGAATATGATGGGGCTGTATGA
TGGGATGGAGCACCTCATTTATGGGGAGCCCAGGAAGCTGCTCACCCAAGATTGGGTGCAGGAAAACTAC
CTGGAGTACCGGCAGGTGCCTGGCAGTGATCCTGCACGGTATGAGTTTCTGTGGGGTCCAAGGGCTCATG
CTGAAATTAGGAAGATGAGTCTCCTGAAATTTTTGGCCAAGGTAAATGGGAGTGATCCAAGATCCTTCCC
ACTGTGGTATGAGGAGGCTTTGAAAGATGAGGAAGAGAGAGCCCAGGACAGAATTGCCACCACAGATGAT
ACTACTGCCATGGCCAGTGCAAGTTCTAGCGCTACAGGTAGCTTCTCCTACCCTGAATAA

Translation (369 aa):
MPRAPKRQRCMPEEDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPST
PEEVSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTD
LVQFLLFKYQMKEPITKAEILESVIRNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSLGLT
YDGMLSDVQSMPKTGILILILSIVFIEGYCTPEEVIWEALNMMGLYDGMEHLIYGEPRKLLTQDWVQENY
LEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNGSDPRSFPLWYEEALKDEEERAQDRIATTDD
TTAMASASSSATGSFSYPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH